myRT

myRT report for GCA_004214525.1_ASM421452v1

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Seq: RHHF01000002.1 (450391 bp)
Overview 1 RT 1: 316169-323190 bp Neighborhood of RT #1 [316169, 323363] CheY SpoIIE HATPase_RsbW-like COG1315 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 316169-317845 bp Feature: domain Description: CheY Location: 316175-316529 bp Feature: domain Description: CheY Location: 31 61 75-31 6529 bp Feature: domain Description: SpoIIE Location: 316745-317306 bp Feature: domain Description: SpoIIE Location: 31 6745-31 7306 bp Feature: domain Description: HATPase_RsbW-like Location: 317498-317834 bp Feature: domain Description: HATPase_RsbW-like Location: 31 7498-31 7834 bp Feature: gene Location: 318067-319740 bp Feature: domain Description: COG1315 Location: 318118-319732 bp Feature: domain Description: COG1 31 5 Location: 31 81 1 8-31 9732 bp Feature: gene Location: 320135-321067 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 320237-320828 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 320237-320828 bp Feature: gene Location: 321060-322688 bp Feature: domain Description: COG3950 Location: 321249-322629 bp Feature: domain Description: COG3950 Location: 321 249-322629 bp Feature: gene Location: 322695-323363 bp Feature: domain Description: TIGR02646 Location: 322794-323190 bp Feature: domain Description: TIGR02646 Location: 322794-3231 90 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RHHF01000070.1 (1014 bp)
Overview 1 RT 1: 72-831 bp Neighborhood of RT #1 [72, 1013] RVT-GII GIIM Feature: gene Location: 72-1013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75-564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75-564 bp Feature: domain Description: GIIM Note: maturase Location: 615-831 bp Feature: domain Description: GIIM Note: maturase Location: 615-831 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RHHF01000032.1 (37846 bp)
Overview 1 RT 1: 4146-7218 bp Neighborhood of RT #1 [4146, 7679] RVT-DGRs Avd_like pfam03781 Feature: gene Location: 4146-4355 bp Feature: gene Location: 4446-4739 bp Feature: gene Location: 4740-6008 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5181-5805 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5181-5805 bp Feature: gene Location: 6005-6361 bp Feature: domain Description: Avd_like Location: 6029-6329 bp Feature: domain Description: Avd_like Location: 6029-63 29 bp Feature: gene Location: 6429-7679 bp Feature: domain Description: pfam03781 Location: 6897-7218 bp Feature: domain Description: pfam03 781 Location: 6897-7218 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RHHF01000073.1 (790 bp)
Overview 1 RT 1: 2-788 bp Neighborhood of RT #1 [2, 788] RVT-GII Feature: gene Location: 2-328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 215-326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 215-326 bp Feature: gene Location: 525-788 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RHHF01000043.1 (13151 bp)
Overview 1 RT 1: 3194-10061 bp Neighborhood of RT #1 [3194, 10528] Phage_GPA Mrr_cat zf-C4_Topoisom RVT-Retrons AAA_15 PRK05973 Feature: gene Location: 3194-4738 bp Feature: domain Description: Phage_GPA Location: 3557-4301 bp Feature: domain Description: Phage_GPA Location: 35 5 7-4301 bp Feature: gene Location: 4827-5684 bp Feature: domain Description: Mrr_cat Location: 5160-5490 bp Feature: domain Description: Mrr_cat Location: 5 160-5 490 bp Feature: domain Description: zf-C4_Topoisom Location: 5562-5673 bp Feature: domain Description: zf-C4_Topoisom Location: 5 5 62-5 673 bp Feature: gene Location: 5824-6942 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6004-6550 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6004-65 5 0 bp Feature: gene Location: 7081-9336 bp Feature: domain Description: AAA_15 Location: 7084-8080 bp Feature: domain Description: AAA_15 Location: 7084-8080 bp Feature: gene Location: 9845-10528 bp Feature: domain Description: PRK05973 Location: 9875-10061 bp Feature: domain Description: PRK05 973 Location: 9875 -10061 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RHHF01000031.1 (40092 bp)
Overview 1 RT 1: 4287-8551 bp Neighborhood of RT #1 [4287, 8565] RVT-GII GIIM RpsT MviN Feature: gene Location: 4287-4463 bp Feature: gene Location: 4677-4832 bp Feature: gene Location: 5140-6354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5284-5905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5284-5905 bp Feature: domain Description: GIIM Note: maturase Location: 5956-6175 bp Feature: domain Description: GIIM Note: maturase Location: 5956 -6 175 bp Feature: gene Location: 6493-6753 bp Feature: domain Description: RpsT Location: 6496-6748 bp Feature: domain Description: RpsT Location: 6 496 -6 748 bp Feature: gene Location: 7003-8565 bp Feature: domain Description: MviN Location: 7009-8551 bp Feature: domain Description: MviN Location: 7009-8551 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT