myRT

myRT report for GCA_004282635.1_ASM428263v1

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Seq: SHHN01000059.1 (16631 bp)
Overview 1 RT 1: 10302-14284 bp Neighborhood of RT #1 [10302, 14310] Asparaginase_2 RVT-GII DcuC Feature: gene Location: 10302-11333 bp Feature: domain Description: Asparaginase_2 Location: 10392-11325 bp Feature: domain Description: Asparaginase_2 Location: 1 0392-1 1 325 bp Feature: gene Location: 11660-11809 bp Feature: gene Location: 11857-12303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12163-12265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 63-1 2265 bp Feature: gene Location: 12525-12896 bp Feature: gene Location: 12949-14310 bp Feature: domain Description: DcuC Location: 12952-14284 bp Feature: domain Description: DcuC Location: 1 2952-1 4284 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Asparaginase_2 (pfam01112), RVT-GII, DcuC (TIGR00771)

Seq: SHHN01000007.1 (163849 bp)
Overview 1 RT 1: 110839-114752 bp 2 RT 2: 130475-135445 bp Neighborhood of RT #1 [110839, 114752] PRK10947 RVT-AbiP2 RepL Neighborhood of RT #2 [130475, 135445] HTH_XRE RVT-Retrons PRK13889 Feature: gene Location: 110839-111207 bp Feature: gene Location: 111277-111537 bp Feature: domain Description: PRK10947 Location: 111292-111514 bp Feature: domain Description: PRK10947 Location: 1112 92 -111514 bp Feature: gene Location: 111734-113278 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 112163-112622 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 112 163-112 62 2 bp Feature: gene Location: 113634-114179 bp Feature: domain Description: RepL Location: 113757-114129 bp Feature: domain Description: RepL Location: 113757-11412 9 bp Feature: gene Location: 114612-114752 bp Feature: gene Location: 130475-130690 bp Feature: gene Location: 130781-131062 bp Feature: domain Description: HTH_XRE Location: 130796-130961 bp Feature: domain Description: HTH_XRE Location: 130796-130961 bp Feature: gene Location: 131055-132155 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 131196-131748 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 131196-131748 bp Feature: gene Location: 132232-133932 bp Feature: domain Description: PRK13889 Location: 132436-133012 bp Feature: domain Description: PRK13889 Location: 132 436-133012 bp Feature: gene Location: 134576-135445 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10947 (DNA-binding transcriptional regulator H-NS), RVT-AbiP2, RepL (pfam05732), HTH_XRE (smart00530), RVT-Retrons, PRK13889 (conjugal transfer relaxase TraA; Provisional)