myRT

myRT report for GCA_004282775.1_ASM428277v1

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Seq: SHHI01000023.1 (82519 bp)
Overview 1 RT 1: 64403-70965 bp Neighborhood of RT #1 [64403, 70973] DUF5405 Phage_GPA RVT-Retrons ABC_ATPase Q Feature: gene Location: 64403-64678 bp Feature: domain Description: DUF5405 Location: 64421-64661 bp Feature: domain Description: DUF5405 Location: 64421 -64661 bp Feature: gene Location: 64668-66938 bp Feature: domain Description: Phage_GPA Location: 65067-66054 bp Feature: domain Description: Phage_GPA Location: 65067-66054 bp Feature: gene Location: 67265-68254 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 67382-67943 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 67382-67943 bp Feature: gene Location: 68256-69608 bp Feature: domain Description: ABC_ATPase Location: 68316-69039 bp Feature: domain Description: ABC_ATPase Location: 6831 6-69039 bp Feature: gene Location: 69939-70973 bp Feature: domain Description: Q Location: 69942-70965 bp Feature: domain Description: Q Location: 69942-70965 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5405 (pfam17399), Phage_GPA (pfam05840), RVT-Retrons, ABC_ATPase (pfam09818), Q (PHA02536)

Seq: SHHI01000040.1 (34479 bp)
Overview 1 RT 1: 6647-11007 bp Neighborhood of RT #1 [6647, 11009] D PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 6647-7747 bp Feature: domain Description: D Location: 6653-7736 bp Feature: domain Description: D Location: 6653-7736 bp Feature: gene Location: 7838-8056 bp Feature: domain Description: PRK09678 Location: 7841-8039 bp Feature: domain Description: PRK09678 Location: 7841-8039 bp Feature: gene Location: 8460-9233 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 8595-9048 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 8595-9048 bp Feature: gene Location: 9919-10401 bp Feature: domain Description: SmpB Location: 9949-10396 bp Feature: domain Description: SmpB Location: 9949-10396 bp Feature: gene Location: 10533-11009 bp Feature: domain Description: PRK10724 Location: 10539-11007 bp Feature: domain Description: PRK1072 4 Location: 10539-11007 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT D (PHA02561), PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)