myRT

myRT report for GCA_004283175.1_ASM428317v1

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Seq: RXNW01000027.1 (9316 bp)
Overview 1 RT 1: 721-6324 bp Neighborhood of RT #1 [721, 6338] RVT_N RVT-GII PRK11768 DEAH_box_HrpB Feature: gene Location: 721-1581 bp Feature: domain Description: RVT_N Location: 772-1015 bp Feature: domain Description: RVT_N Location: 772-1 01 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1060-1564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 060-1 564 bp Feature: gene Location: 2496-3476 bp Feature: domain Description: PRK11768 Location: 2508-3465 bp Feature: domain Description: PRK1 1 768 Location: 2508-3465 bp Feature: gene Location: 3738-6338 bp Feature: domain Description: DEAH_box_HrpB Location: 3792-6324 bp Feature: domain Description: DEAH_box_HrpB Location: 3792-6324 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, PRK11768 (serine/threonine protein kinase), DEAH_box_HrpB (TIGR01970)

Seq: RXNW01000004.1 (264967 bp)
Overview 1 RT 1: 3736-10651 bp Neighborhood of RT #1 [3736, 10680] CAP_ED CPBP RVT-UNC PRK10060 Feature: gene Location: 3736-5796 bp Feature: gene Location: 5809-6921 bp Feature: domain Description: CAP_ED Location: 5848-6148 bp Feature: domain Description: CAP_ED Location: 5848-6148 bp Feature: domain Description: CPBP Location: 6628-6874 bp Feature: domain Description: CPBP Location: 662 8-6874 bp Feature: gene Location: 6896-8368 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 7220-7856 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 72 2 0-7856 bp Feature: gene Location: 8532-9008 bp Feature: gene Location: 9034-10680 bp Feature: domain Description: PRK10060 Location: 9358-10651 bp Feature: domain Description: PRK10060 Location: 9358-10651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CAP_ED (cl00047), CPBP, RVT-DGRs/RVT-UG26/RVT-CRISPR/RVT-UG27(RVT-UNC), PRK10060 (cyclic di-GMP phosphodiesterase)

Seq: RXNW01000005.1 (252539 bp)
Overview 1 RT 1: 186309-190765 bp Neighborhood of RT #1 [186309, 190765] Phage_int_SAM_2 Integrase_1 Phage_int_SAM_2 RVT-AbiP2 Feature: gene Location: 186309-187151 bp Feature: domain Description: Phage_int_SAM_2 Location: 186318-186540 bp Feature: domain Description: Phage_int_SAM_2 Location: 1863 18-186540 bp Feature: domain Description: Integrase_1 Location: 186585-186966 bp Feature: domain Description: Integrase_1 Location: 186585-186966 bp Feature: gene Location: 187195-188004 bp Feature: domain Description: Phage_int_SAM_2 Location: 187240-187468 bp Feature: domain Description: Phage_int_SAM_2 Location: 187240-187468 bp Feature: gene Location: 188608-190143 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 189055-189529 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 189055-189529 bp Feature: gene Location: 190261-190518 bp Feature: gene Location: 190496-190765 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_2 (pfam12834), Integrase_1 (pfam12835), RVT-AbiP2