myRT

myRT report for GCA_004292695.1_ASM429269v1

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Seq: RDXV01000089.1 (20542 bp)
Overview 1 RT 1: 12493-17271 bp Neighborhood of RT #1 [12493, 17480] apcD RVT_N RVT-GII GIIM HNH DUF2887 Feature: gene Location: 12493-12978 bp Feature: domain Description: apcD Location: 12496-12976 bp Feature: domain Description: apcD Location: 1 2496-1 2976 bp Feature: gene Location: 13530-13727 bp Feature: gene Location: 14120-15883 bp Feature: domain Description: RVT_N Location: 14189-14435 bp Feature: domain Description: RVT_N Location: 1 41 89-1 4435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14477-15161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4477-1 51 61 bp Feature: domain Description: GIIM Note: maturase Location: 15263-15494 bp Feature: domain Description: GIIM Note: maturase Location: 1 5263-1 5494 bp Feature: domain Description: HNH Note: nucleases Location: 15719-15857 bp Feature: domain Description: HNH Note: nucleases Location: 1 571 9-1 5857 bp Feature: gene Location: 15955-16614 bp Feature: gene Location: 16629-17480 bp Feature: domain Description: DUF2887 Location: 16674-17271 bp Feature: domain Description: DUF2887 Location: 1 6674-1 7271 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT apcD (CHL00090), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), DUF2887 (pfam11103)

Seq: RDXV01000183.1 (10136 bp)
Overview 1 RT 1: 1667-7786 bp Neighborhood of RT #1 [1667, 7800] PhdYeFM_antitox COG2442 RVT-UG25 UvrD PRK07883 UvrD UPF0175 Feature: gene Location: 1667-1957 bp Feature: domain Description: PhdYeFM_antitox Location: 1691-1883 bp Feature: domain Description: PhdYeFM_antitox Location: 1691-1883 bp Feature: gene Location: 2019-2348 bp Feature: domain Description: COG2442 Location: 2112-2316 bp Feature: domain Description: COG2 442 Location: 2 112 -2 316 bp Feature: gene Location: 2861-5026 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 3419-3830 bp Feature: RT Description: RVT-UG2 5 Note: UG2 5 RT Location: 3419-3830 bp Feature: gene Location: 5044-7503 bp Feature: domain Description: UvrD Location: 5059-6328 bp Feature: domain Description: UvrD Location: 5059-632 8 bp Feature: domain Description: PRK07883 Location: 6412-6919 bp Feature: domain Description: PRK07883 Location: 6412 -6919 bp Feature: domain Description: UvrD Location: 6979-7489 bp Feature: domain Description: UvrD Location: 6979-7489 bp Feature: gene Location: 7543-7800 bp Feature: domain Description: UPF0175 Location: 7567-7786 bp Feature: domain Description: UPF0175 Location: 7567-7786 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PhdYeFM_antitox (pfam02604), COG2442 (Uncharacterized conserved protein, DUF433 family ), RVT-UG25, UvrD (COG0210), PRK07883 (DEDD exonuclease domain-containing protein), UPF0175 (pfam03683)