myRT

myRT report for GCA_004292955.1_ASM429295v1

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Seq: RDXX01000152.1 (5482 bp)
Overview 1 RT 1: 2-5205 bp Neighborhood of RT #1 [2, 5213] RVT-GII GIIM McrA PAS PAS PAS PAS BaeS Feature: gene Location: 2-1450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92-650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92-650 bp Feature: domain Description: GIIM Note: maturase Location: 752-980 bp Feature: domain Description: GIIM Note: maturase Location: 752-980 bp Feature: domain Description: McrA Location: 1079-1370 bp Feature: domain Description: McrA Location: 1 079-1 370 bp Feature: gene Location: 1797-5213 bp Feature: domain Description: PAS Location: 2340-2628 bp Feature: domain Description: PAS Location: 2340-2628 bp Feature: domain Description: PAS Location: 2697-2943 bp Feature: domain Description: PAS Location: 2697-2943 bp Feature: domain Description: PAS Location: 2988-3513 bp Feature: domain Description: PAS Location: 2988-351 3 bp Feature: domain Description: PAS Location: 3546-3933 bp Feature: domain Description: PAS Location: 3546-3933 bp Feature: domain Description: BaeS Location: 4380-5205 bp Feature: domain Description: BaeS Location: 4380-5205 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RDXX01000113.1 (23763 bp)
Overview 1 RT 1: 82-2712 bp Neighborhood of RT #1 [82, 2712] RVT_N RVT-GII Feature: gene Location: 82-570 bp Feature: domain Description: RVT_N Location: 124-370 bp Feature: domain Description: RVT_N Location: 12 4-370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 412-553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 412 -553 bp Feature: gene Location: 1473-2177 bp Feature: gene Location: 2431-2712 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RDXX01000056.1 (54111 bp)
Overview 1 RT 1: 51996-54006 bp Neighborhood of RT #1 [51996, 54110] HNH_3 RVT-GII GIIM McrA Feature: gene Location: 51996-52295 bp Feature: gene Location: 52369-52608 bp Feature: domain Description: HNH_3 Location: 52525-52588 bp Feature: domain Description: HNH_3 Location: 52525-52588 bp Feature: gene Location: 52698-54110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52791-53334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52791-53 3 3 4 bp Feature: domain Description: GIIM Note: maturase Location: 53418-53646 bp Feature: domain Description: GIIM Note: maturase Location: 53 418-53 646 bp Feature: domain Description: McrA Location: 53736-54006 bp Feature: domain Description: McrA Location: 53 73 6-54006 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RDXX01000116.1 (12262 bp)
Overview 1 RT 1: 2-5643 bp Neighborhood of RT #1 [2, 6137] RVT-GII GIIM McrA AAA_16 AAA_16 HTH_ARSR TPR TPR_1 TPR TPR_1 TPR TPR_1 Feature: gene Location: 2-1324 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92-608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92-608 bp Feature: domain Description: GIIM Note: maturase Location: 707-920 bp Feature: domain Description: GIIM Note: maturase Location: 707-920 bp Feature: domain Description: McrA Location: 1016-1280 bp Feature: domain Description: McrA Location: 1016-1280 bp Feature: gene Location: 1463-2608 bp Feature: domain Description: AAA_16 Location: 1508-1979 bp Feature: domain Description: AAA_16 Location: 1508-1979 bp Feature: gene Location: 2982-6137 bp Feature: domain Description: AAA_16 Location: 3102-3468 bp Feature: domain Description: AAA_16 Location: 3102-34 68 bp Feature: domain Description: HTH_ARSR Location: 3891-4071 bp Feature: domain Description: HTH_ARSR Location: 3891-4 071 bp Feature: domain Description: TPR Location: 4431-4719 bp Feature: domain Description: TPR Location: 4 4 31-4 719 bp Feature: domain Description: TPR_1 Location: 4746-4839 bp Feature: domain Description: TPR_1 Location: 4 74 6-4 839 bp Feature: domain Description: TPR Location: 4848-5106 bp Feature: domain Description: TPR Location: 4 84 8-5106 bp Feature: domain Description: TPR_1 Location: 5154-5247 bp Feature: domain Description: TPR_1 Location: 5154 -524 7 bp Feature: domain Description: TPR Location: 5259-5514 bp Feature: domain Description: TPR Location: 5259-5514 bp Feature: domain Description: TPR_1 Location: 5562-5643 bp Feature: domain Description: TPR_1 Location: 5562-564 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RDXX01000111.1 (28803 bp)
Overview 1 RT 1: 27297-28710 bp Neighborhood of RT #1 [27297, 28727] OrfB_IS605 RVT_N RVT-GII Feature: gene Location: 27297-27773 bp Feature: domain Description: OrfB_IS605 Location: 27303-27528 bp Feature: domain Description: OrfB_IS605 Location: 27303-275 28 bp Feature: gene Location: 27969-28343 bp Feature: gene Location: 28251-28727 bp Feature: domain Description: RVT_N Location: 28281-28521 bp Feature: domain Description: RVT_N Location: 28281-285 21 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28569-28710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285 69-28710 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT