myRT

myRT report for GCA_004293265.1_ASM429326v1

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Seq: RDXZ01000083.1 (16812 bp)
Overview 1 RT 1: 1-5638 bp Neighborhood of RT #1 [1, 5638] AAA_13 RVT-UG5 nitrilase Feature: gene Location: 1-306 bp Feature: domain Description: AAA_13 Location: 34-295 bp Feature: domain Description: AAA_1 3 Location: 34-295 bp Feature: gene Location: 552-3845 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1080-1599 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 080-1 599 bp Feature: domain Description: nitrilase Location: 3072-3711 bp Feature: domain Description: nitrilase Location: 3072-371 1 bp Feature: gene Location: 3888-4652 bp Feature: gene Location: 4646-5638 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_13 (pfam13166), RVT-UG5, nitrilase (cl11424)

Seq: RDXZ01000028.1 (38970 bp)
Overview 1 RT 1: 18420-24565 bp Neighborhood of RT #1 [18420, 24576] OmpR reco RVT-CRISPR-like 2A51 EVE Feature: gene Location: 18420-19124 bp Feature: domain Description: OmpR Location: 18438-19113 bp Feature: domain Description: OmpR Location: 18438-19113 bp Feature: gene Location: 19430-20134 bp Feature: domain Description: reco Location: 19442-19895 bp Feature: domain Description: reco Location: 19442 -19895 bp Feature: gene Location: 20288-22681 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 21407-21815 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2 1407-2 1815 bp Feature: gene Location: 22963-24132 bp Feature: domain Description: 2A51 Location: 23008-24124 bp Feature: domain Description: 2 A51 Location: 2 3008-2 412 4 bp Feature: gene Location: 24172-24576 bp Feature: domain Description: EVE Location: 24178-24565 bp Feature: domain Description: EVE Location: 2 4178-2 4565 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OmpR (COG0745), reco (TIGR00613), RVT-CRISPR, 2A51 (TIGR00937), EVE (pfam01878)

Seq: RDXZ01000042.1 (25920 bp)
Overview 1 RT 1: 12380-19779 bp Neighborhood of RT #1 [12380, 21317] DUF3887 ampC ampC RVT-Retrons BtuB CarbopepD_reg_2 LolA_like Feature: gene Location: 12380-13615 bp Feature: gene Location: 13839-15266 bp Feature: domain Description: DUF3887 Location: 13950-14178 bp Feature: domain Description: DUF3 887 Location: 13 950-14178 bp Feature: domain Description: ampC Location: 14244-15099 bp Feature: domain Description: ampC Location: 14244-15099 bp Feature: domain Description: ampC Location: 15111-15252 bp Feature: domain Description: ampC Location: 15111-15252 bp Feature: gene Location: 15467-16849 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16007-16622 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16007-16622 bp Feature: gene Location: 16938-18848 bp Feature: domain Description: BtuB Location: 17064-18846 bp Feature: domain Description: BtuB Location: 17064-18846 bp Feature: gene Location: 18909-21317 bp Feature: domain Description: CarbopepD_reg_2 Location: 18978-19233 bp Feature: domain Description: CarbopepD_reg_2 Location: 18978-1923 3 bp Feature: domain Description: LolA_like Location: 19626-19779 bp Feature: domain Description: LolA_like Location: 19626-19779 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3887 (pfam13026), ampC (PRK11289), RVT-Retrons, BtuB (COG4206), CarbopepD_reg_2 (pfam13715), LolA_like (pfam17131)