myRT

myRT report for GCA_004294345.1_ASM429434v1

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Seq: REAI01000043.1 (65015 bp)
Overview 1 RT 1: 30948-33985 bp Neighborhood of RT #1 [30948, 33985] RHH_7 RVT_N RVT-GII McrA Feature: gene Location: 30948-31181 bp Feature: domain Description: RHH_7 Location: 30978-31110 bp Feature: domain Description: RHH_7 Location: 30978-31 1 1 0 bp Feature: gene Location: 31229-31429 bp Feature: gene Location: 31704-33311 bp Feature: domain Description: RVT_N Location: 31740-31977 bp Feature: domain Description: RVT_N Location: 31 740-31 977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32037-32661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32037-32661 bp Feature: domain Description: McrA Location: 32892-33216 bp Feature: domain Description: McrA Location: 32892-3321 6 bp Feature: gene Location: 33350-33547 bp Feature: gene Location: 33551-33985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: REAI01000012.1 (64497 bp)
Overview 1 RT 1: 41327-46473 bp Neighborhood of RT #1 [41327, 46481] HHH_3 HHH_3 RVT_N RVT-GII GIIM HNH DUF29 ChlG Feature: gene Location: 41327-42031 bp Feature: domain Description: HHH_3 Location: 41642-41825 bp Feature: domain Description: HHH_3 Location: 41642 -4182 5 bp Feature: domain Description: HHH_3 Location: 41876-42002 bp Feature: domain Description: HHH_3 Location: 41876-42 002 bp Feature: gene Location: 42348-42512 bp Feature: gene Location: 42639-44450 bp Feature: domain Description: RVT_N Location: 42675-42918 bp Feature: domain Description: RVT_N Location: 42 675-42 918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42963-43647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 963-43647 bp Feature: domain Description: GIIM Note: maturase Location: 43746-43980 bp Feature: domain Description: GIIM Note: maturase Location: 43746-43980 bp Feature: domain Description: HNH Note: nucleases Location: 44205-44340 bp Feature: domain Description: HNH Note: nucleases Location: 442 05-44340 bp Feature: gene Location: 45127-45273 bp Feature: domain Description: DUF29 Location: 45133-45250 bp Feature: domain Description: DUF2 9 Location: 45133-452 50 bp Feature: gene Location: 45393-46481 bp Feature: domain Description: ChlG Location: 45558-46473 bp Feature: domain Description: ChlG Location: 45558-46473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: REAI01000146.1 (9549 bp)
Overview 1 RT 1: 2-8585 bp Neighborhood of RT #1 [2, 8602] TamB TamB TamB RVT_N RVT-GII GIIM McrA PDDEXK_2 fliH DUF4351 Feature: gene Location: 2-514 bp Feature: gene Location: 511-4221 bp Feature: domain Description: TamB Location: 1333-1831 bp Feature: domain Description: TamB Location: 13 3 3 -183 1 bp Feature: domain Description: TamB Location: 2194-2605 bp Feature: domain Description: TamB Location: 2194-2605 bp Feature: domain Description: TamB Location: 2989-4219 bp Feature: domain Description: TamB Location: 2989-4219 bp Feature: gene Location: 5207-6910 bp Feature: domain Description: RVT_N Location: 5249-5495 bp Feature: domain Description: RVT_N Location: 5249-5495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5537-6194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 553 7-6194 bp Feature: domain Description: GIIM Note: maturase Location: 6293-6506 bp Feature: domain Description: GIIM Note: maturase Location: 6293 -6506 bp Feature: domain Description: McrA Location: 6602-6866 bp Feature: domain Description: McrA Location: 6602-6866 bp Feature: gene Location: 7073-7438 bp Feature: gene Location: 7556-8602 bp Feature: domain Description: PDDEXK_2 Location: 7574-8240 bp Feature: domain Description: PDDEXK_2 Location: 7574-8240 bp Feature: domain Description: fliH Location: 8291-8408 bp Feature: domain Description: fliH Location: 8291-8408 bp Feature: domain Description: DUF4351 Location: 8414-8585 bp Feature: domain Description: DUF43 51 Location: 8414-8585 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: REAI01000007.1 (108532 bp)
Overview 1 RT 1: 1607-6784 bp Neighborhood of RT #1 [1607, 6789] PRK07459 RVT_N RVT-GII McrA RE_XamI STKc_PknB_like COG3899 Feature: gene Location: 1607-2008 bp Feature: domain Description: PRK07459 Location: 1610-1922 bp Feature: domain Description: PRK074 59 Location: 1610-1922 bp Feature: gene Location: 2225-2563 bp Feature: gene Location: 3012-4526 bp Feature: domain Description: RVT_N Location: 3048-3294 bp Feature: domain Description: RVT_N Location: 304 8-3294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3345-3939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334 5-3939 bp Feature: domain Description: McrA Location: 4176-4497 bp Feature: domain Description: McrA Location: 4 176-4 4 97 bp Feature: gene Location: 4572-5051 bp Feature: domain Description: RE_XamI Location: 4647-5013 bp Feature: domain Description: RE_XamI Location: 4 64 7-5013 bp Feature: gene Location: 5119-6789 bp Feature: domain Description: STKc_PknB_like Location: 5170-5932 bp Feature: domain Description: STKc_PknB_like Location: 5170-5932 bp Feature: domain Description: COG3899 Location: 6025-6784 bp Feature: domain Description: COG3899 Location: 6025-6784 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: REAI01000193.1 (7653 bp)
Overview 1 RT 1: 495-5163 bp Neighborhood of RT #1 [495, 5228] RVT_N RVT-GII McrA FtsQ PRK09330 Feature: gene Location: 495-638 bp Feature: gene Location: 656-2317 bp Feature: domain Description: RVT_N Location: 776-1019 bp Feature: domain Description: RVT_N Location: 776-1019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1073-1724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1073-1724 bp Feature: domain Description: McrA Location: 1811-2294 bp Feature: domain Description: McrA Location: 1811-2294 bp Feature: gene Location: 2675-3574 bp Feature: domain Description: FtsQ Location: 2699-3533 bp Feature: domain Description: FtsQ Location: 2699-35 33 bp Feature: gene Location: 3957-5228 bp Feature: domain Description: PRK09330 Location: 4128-5163 bp Feature: domain Description: PRK09330 Location: 4128-5 163 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT