myRT

myRT report for GCA_004297045.1_ASM429704v1

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Seq: SCVL01000106.1 (19471 bp)
Overview 1 RT 1: 6684-11582 bp Neighborhood of RT #1 [6684, 11582] RVT-Retrons Feature: gene Location: 6684-6974 bp Feature: gene Location: 7007-7273 bp Feature: gene Location: 7353-9128 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7566-8118 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7566-81 1 8 bp Feature: gene Location: 9370-11097 bp Feature: gene Location: 11280-11582 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: SCVL01000059.1 (1952 bp)
Overview 1 RT 1: 3-1949 bp Neighborhood of RT #1 [3, 1949] RVT-UNC Feature: gene Location: 3-1250 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 867-1047 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 867-1047 bp Feature: gene Location: 1287-1949 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-G2L4/RVT-G2L/RVT-DGRs(RVT-UNC)

Seq: SCVL01000050.1 (4959 bp)
Overview 1 RT 1: 1-4957 bp Neighborhood of RT #1 [1, 4957] Phage_int_SAM_1 recomb_XerD MPTase-PolyVal RVT-GII Intron_maturas2 ArdC Feature: gene Location: 1-867 bp Feature: domain Description: Phage_int_SAM_1 Location: 112-373 bp Feature: domain Description: Phage_int_SAM_1 Location: 112-3 73 bp Feature: domain Description: recomb_XerD Location: 577-832 bp Feature: domain Description: recomb_XerD Location: 577-83 2 bp Feature: gene Location: 977-1414 bp Feature: domain Description: MPTase-PolyVal Location: 1094-1334 bp Feature: domain Description: MPTase-PolyVal Location: 1094-13 3 4 bp Feature: gene Location: 1417-3318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1684-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1684-2521 bp Feature: domain Description: Intron_maturas2 Location: 2644-2890 bp Feature: domain Description: Intron_maturas2 Location: 2644-2890 bp Feature: gene Location: 3948-4331 bp Feature: domain Description: ArdC Location: 3966-4320 bp Feature: domain Description: ArdC Location: 3 966-43 20 bp Feature: gene Location: 4328-4957 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_1 (pfam02899), recomb_XerD (TIGR02225), MPTase-PolyVal (pfam18818), RVT-GII, Intron_maturas2 (pfam01348), ArdC (COG4227)

Seq: SCVL01000093.1 (5684 bp)
Overview 1 RT 1: 1035-5587 bp Neighborhood of RT #1 [1035, 5587] RVT-GII Intron_maturas2 Feature: gene Location: 1035-1523 bp Feature: gene Location: 1774-2217 bp Feature: gene Location: 2511-3908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2631-3468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2631-34 68 bp Feature: domain Description: Intron_maturas2 Location: 3555-3837 bp Feature: domain Description: Intron_maturas2 Location: 3555-3837 bp Feature: gene Location: 4640-4933 bp Feature: gene Location: 4946-5587 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)