myRT

myRT report for GCA_004297385.1_ASM429738v1

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Seq: SCUW01000440.1 (8346 bp)
Overview 1 RT 1: 1732-6922 bp Neighborhood of RT #1 [1732, 7185] DDE_Tnp_1 RVT-GII GIIM Nterm_IS4 DDE_Tnp_1 Feature: gene Location: 1732-1884 bp Feature: gene Location: 2238-3335 bp Feature: domain Description: DDE_Tnp_1 Location: 2796-3234 bp Feature: domain Description: DDE_Tnp_1 Location: 2796-3234 bp Feature: gene Location: 3750-5054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4035-4671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4035-4671 bp Feature: domain Description: GIIM Note: maturase Location: 4746-4971 bp Feature: domain Description: GIIM Note: maturase Location: 4746-4971 bp Feature: gene Location: 5201-5644 bp Feature: gene Location: 5812-7185 bp Feature: domain Description: Nterm_IS4 Location: 5908-6187 bp Feature: domain Description: Nterm_IS4 Location: 5908-61 87 bp Feature: domain Description: DDE_Tnp_1 Location: 6262-6922 bp Feature: domain Description: DDE_Tnp_1 Location: 6262-6922 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), Nterm_IS4 (pfam13006)

Seq: SCUW01000989.1 (2843 bp)
Overview 1 RT 1: 456-2756 bp Neighborhood of RT #1 [456, 2756] RVT-GII GIIM Feature: gene Location: 456-2165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1140-1785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1140-1785 bp Feature: domain Description: GIIM Note: maturase Location: 1860-2067 bp Feature: domain Description: GIIM Note: maturase Location: 1860-2 067 bp Feature: gene Location: 2547-2756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SCUW01000519.1 (1952 bp)
Overview 1 RT 1: 2-1626 bp Neighborhood of RT #1 [2, 1949] HEPN_Apea RVT-UNC Feature: gene Location: 2-892 bp Feature: domain Description: HEPN_Apea Location: 548-791 bp Feature: domain Description: HEPN_Apea Location: 548-791 bp Feature: gene Location: 1089-1949 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1251-1626 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1251-1626 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEPN_Apea (pfam18739), RVT-UG28/RVT-GII/RVT-CRISPR/RVT-UG17(RVT-UNC)

Seq: SCUW01000712.1 (10486 bp)
Overview 1 RT 1: 1905-5769 bp Neighborhood of RT #1 [1905, 5769] Methyltransf_31 RVT-GII GIIM Feature: gene Location: 1905-2837 bp Feature: domain Description: Methyltransf_31 Location: 2049-2334 bp Feature: domain Description: Methyltransf_31 Location: 204 9-2334 bp Feature: gene Location: 2815-3057 bp Feature: gene Location: 3758-5083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4058-4706 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 058-4 706 bp Feature: domain Description: GIIM Note: maturase Location: 4781-5015 bp Feature: domain Description: GIIM Note: maturase Location: 4 781-5015 bp Feature: gene Location: 5091-5219 bp Feature: gene Location: 5335-5769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Methyltransf_31 (pfam13847), RVT-GII, GIIM (pfam08388)

Seq: SCUW01000370.1 (3638 bp)
Overview 1 RT 1: 83-3507 bp Neighborhood of RT #1 [83, 3507] RVT-GII GIIM Feature: gene Location: 83-550 bp Feature: gene Location: 1165-2496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1459-2119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145 9-2119 bp Feature: domain Description: GIIM Note: maturase Location: 2191-2398 bp Feature: domain Description: GIIM Note: maturase Location: 2191-2398 bp Feature: gene Location: 2835-3026 bp Feature: gene Location: 3229-3507 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SCUW01000722.1 (1731 bp)
Overview 1 RT 1: 2-1423 bp Neighborhood of RT #1 [2, 1452] RVT-Retrons HicB HicA_toxin Feature: gene Location: 2-814 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 95-626 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 95-6 26 bp Feature: gene Location: 953-1225 bp Feature: domain Description: HicB Location: 989-1193 bp Feature: domain Description: HicB Location: 989-1193 bp Feature: gene Location: 1222-1452 bp Feature: domain Description: HicA_toxin Location: 1255-1423 bp Feature: domain Description: HicA_toxin Location: 1255-1423 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HicB (pfam05534), HicA_toxin (pfam07927)

Seq: SCUW01000930.1 (2291 bp)
Overview 1 RT 1: 17-1352 bp Neighborhood of RT #1 [17, 1405] RVT-GII GIIM Feature: gene Location: 17-1405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 398-1058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 398-1058 bp Feature: domain Description: GIIM Note: maturase Location: 1139-1352 bp Feature: domain Description: GIIM Note: maturase Location: 1139-1352 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)