myRT

myRT report for GCA_004299205.1_ASM429920v1

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Seq: SIHS01000060.1 (2589 bp)
Overview 1 RT 1: 105-2398 bp Neighborhood of RT #1 [105, 2398] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 105-1937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 369-1200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 369-1 200 bp Feature: domain Description: Intron_maturas2 Location: 1272-1584 bp Feature: domain Description: Intron_maturas2 Location: 1 272-1 584 bp Feature: domain Description: HNHc Note: nucleases Location: 1734-1908 bp Feature: domain Description: HNHc Note: nucleases Location: 1 734-1 908 bp Feature: gene Location: 2183-2398 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SIHS01000056.1 (5399 bp)
Overview 1 RT 1: 3-4035 bp Neighborhood of RT #1 [3, 4070] RVT-GII VirB4_CagE VirB4_CagE Feature: gene Location: 3-986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 321-987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 1-987 bp Feature: gene Location: 1235-1456 bp Feature: gene Location: 1695-4070 bp Feature: domain Description: VirB4_CagE Location: 2199-2634 bp Feature: domain Description: VirB4_CagE Location: 2 199-2 634 bp Feature: domain Description: VirB4_CagE Location: 2859-4035 bp Feature: domain Description: VirB4_CagE Location: 2 859-4035 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SIHS01000012.1 (137489 bp)
Overview 1 RT 1: 15338-18952 bp Neighborhood of RT #1 [15338, 18954] Phage_holin_4_1 RVT-DGRs Avd_like PHA00653 Feature: gene Location: 15338-15826 bp Feature: domain Description: Phage_holin_4_1 Location: 15377-15737 bp Feature: domain Description: Phage_holin_4_1 Location: 153 77-1573 7 bp Feature: gene Location: 15823-16002 bp Feature: gene Location: 16027-17088 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 16264-16885 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 16264-16885 bp Feature: gene Location: 17415-17771 bp Feature: domain Description: Avd_like Location: 17445-17751 bp Feature: domain Description: Avd_like Location: 17445-17751 bp Feature: gene Location: 17812-18954 bp Feature: domain Description: PHA00653 Location: 17935-18952 bp Feature: domain Description: PHA00653 Location: 1793 5-18952 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SIHS01000033.1 (52458 bp)
Overview 1 RT 1: 46882-52038 bp Neighborhood of RT #1 [46882, 52038] AAA_15 RVT-Retrons Feature: gene Location: 46882-47019 bp Feature: gene Location: 47232-48788 bp Feature: domain Description: AAA_15 Location: 47235-48366 bp Feature: domain Description: AAA_15 Location: 4 7235-4 8366 bp Feature: gene Location: 49288-50964 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 49408-49999 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4 94 08-4 9999 bp Feature: gene Location: 51784-52038 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SIHS01000065.1 (1150 bp)
Overview 1 RT 1: 126-285 bp Neighborhood of RT #1 [126, 1148] RVT-GII Feature: gene Location: 126-1148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 129-285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 129-285 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SIHS01000027.1 (76025 bp)
Overview 1 RT 1: 43228-47855 bp Neighborhood of RT #1 [43228, 47855] Smc RVT-DGRs Feature: gene Location: 43228-43425 bp Feature: gene Location: 43428-45737 bp Feature: domain Description: Smc Location: 43482-44172 bp Feature: domain Description: Smc Location: 43482-44172 bp Feature: gene Location: 46126-47352 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 46411-47074 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 46 411-47074 bp Feature: gene Location: 47300-47656 bp Feature: gene Location: 47706-47855 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT