myRT

myRT report for GCA_004299555.1_ASM429955v1

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Seq: SCQU01000010.1 (308486 bp)
Overview 1 RT 1: 292544-299920 bp Neighborhood of RT #1 [292544, 299937] AbiF DUF262 COG3472 RVT-AbiP2 RMtype1_S_Apa101655I-TRD2-CR2_like RMtype1_S_Apa101655I-TRD2-CR2_like HsdM Feature: gene Location: 292544-293506 bp Feature: domain Description: AbiF Location: 292547-293498 bp Feature: domain Description: AbiF Location: 292547-293498 bp Feature: gene Location: 293503-295365 bp Feature: domain Description: DUF262 Location: 293551-294295 bp Feature: domain Description: DUF262 Location: 293551 -294295 bp Feature: domain Description: COG3472 Location: 294442-295165 bp Feature: domain Description: COG3472 Location: 294442-2951 65 bp Feature: gene Location: 295483-296991 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 295936-296389 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 295936-296389 bp Feature: gene Location: 296991-298163 bp Feature: domain Description: RMtype1_S_Apa101655I-TRD2-CR2_like Location: 297150-297411 bp Feature: domain Description: RMtype1 _S_Apa1 01 655I-TRD2-CR2_like Location: 2971 50-29741 1 bp Feature: domain Description: RMtype1_S_Apa101655I-TRD2-CR2_like Location: 297558-298110 bp Feature: domain Description: RMtype1 _S_Apa1 01 655I-TRD2-CR2_like Location: 297558-2981 1 0 bp Feature: gene Location: 298333-299937 bp Feature: domain Description: HsdM Location: 298339-299920 bp Feature: domain Description: HsdM Location: 298339-299920 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiF (COG4823), DUF262 (pfam03235), COG3472 (Uncharacterized protein ), RVT-AbiP2, RMtype1_S_Apa101655I-TRD2-CR2_like (cd17244), HsdM (COG0286)

Seq: SCQU01000002.1 (98050 bp)
Overview 1 RT 1: 16224-23230 bp Neighborhood of RT #1 [16224, 23298] AlbA_2 RVT-UG19 RMtype1_S_TRD-CR_like RMtype1_S_TRD-CR_like HsdM Feature: gene Location: 16224-16727 bp Feature: gene Location: 17270-18445 bp Feature: domain Description: AlbA_2 Location: 17342-17726 bp Feature: domain Description: AlbA_2 Location: 17342 -1772 6 bp Feature: gene Location: 18512-20575 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 18875-19355 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 18875-19355 bp Feature: gene Location: 20585-21742 bp Feature: domain Description: RMtype1_S_TRD-CR_like Location: 20678-21107 bp Feature: domain Description: RMtype1_S_TRD-CR_like Location: 2 0678-2 1107 bp Feature: domain Description: RMtype1_S_TRD-CR_like Location: 21296-21677 bp Feature: domain Description: RMtype1_S_TRD-CR_like Location: 2 12 96-2 1677 bp Feature: gene Location: 21739-23298 bp Feature: domain Description: HsdM Location: 21790-23230 bp Feature: domain Description: HsdM Location: 2 1790-2 32 30 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AlbA_2 (pfam04326), RVT-UG19, RMtype1_S_TRD-CR_like (cl38903), HsdM (COG0286)

Seq: SCQU01000003.1 (252870 bp)
Overview 1 RT 1: 56085-63973 bp Neighborhood of RT #1 [56085, 63973] TrmB FecR RVT_N RVT-GII GIIM HNHc PRK10446 Feature: gene Location: 56085-56864 bp Feature: domain Description: TrmB Location: 56172-56829 bp Feature: domain Description: TrmB Location: 56172-56829 bp Feature: gene Location: 56944-59319 bp Feature: domain Description: FecR Location: 57184-57466 bp Feature: domain Description: FecR Location: 57184-57466 bp Feature: gene Location: 60483-62108 bp Feature: domain Description: RVT_N Location: 60534-60777 bp Feature: domain Description: RVT_N Location: 6053 4-60777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60822-61446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60822-61446 bp Feature: domain Description: GIIM Note: maturase Location: 61500-61731 bp Feature: domain Description: GIIM Note: maturase Location: 61500-6173 1 bp Feature: domain Description: HNHc Note: nucleases Location: 61920-62088 bp Feature: domain Description: HNHc Note: nucleases Location: 61920-62088 bp Feature: gene Location: 62369-63292 bp Feature: domain Description: PRK10446 Location: 62372-63236 bp Feature: domain Description: PRK10446 Location: 623 72-63 23 6 bp Feature: gene Location: 63377-63973 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TrmB (pfam01978), FecR (pfam04773), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK10446 (30S ribosomal protein S6--L-glutamate ligase)