myRT

myRT report for GCA_004299625.1_ASM429962v1

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Seq: SCRV01000049.1 (71690 bp)
Overview 1 RT 1: 1388-6121 bp Neighborhood of RT #1 [1388, 6126] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII GIIM groES Feature: gene Location: 1388-1723 bp Feature: domain Description: TnpB_IS66 Location: 1406-1694 bp Feature: domain Description: TnpB_IS66 Location: 1 406-1 694 bp Feature: gene Location: 1792-3300 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1897-2116 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 897-21 1 6 bp Feature: domain Description: zf-IS66 Location: 2137-2263 bp Feature: domain Description: zf-IS66 Location: 21 37-2263 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2305-3148 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2305-31 48 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3169-3280 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 31 69-3280 bp Feature: gene Location: 3938-5206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4187-4850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 87-4850 bp Feature: domain Description: GIIM Note: maturase Location: 4919-5135 bp Feature: domain Description: GIIM Note: maturase Location: 491 9-51 35 bp Feature: gene Location: 5233-5448 bp Feature: gene Location: 5836-6126 bp Feature: domain Description: groES Location: 5839-6121 bp Feature: domain Description: groES Location: 5839-61 21 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SCRV01000047.1 (51865 bp)
Overview 1 RT 1: 46163-51408 bp Neighborhood of RT #1 [46163, 51408] HTH_23 rve rve_3 RVT-GII RVT-GII COG4710 Feature: gene Location: 46163-48169 bp Feature: domain Description: HTH_23 Location: 46265-46367 bp Feature: domain Description: HTH_2 3 Location: 462 65-46367 bp Feature: domain Description: rve Location: 46853-47321 bp Feature: domain Description: rve Location: 46853-4732 1 bp Feature: domain Description: rve_3 Location: 47342-47504 bp Feature: domain Description: rve_3 Location: 47342 -47504 bp Feature: gene Location: 48166-48801 bp Feature: gene Location: 49149-49685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49155-49533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49155-49533 bp Feature: gene Location: 49640-50401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50051-50345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50051-50345 bp Feature: gene Location: 50493-51077 bp Feature: domain Description: COG4710 Location: 50862-51069 bp Feature: domain Description: COG4710 Location: 50862 -51069 bp Feature: gene Location: 51211-51408 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SCRV01000024.1 (99372 bp)
Overview 1 RT 1: 20479-26547 bp Neighborhood of RT #1 [20479, 26573] ubiB TPMT RVT_N RVT-GII GIIM HNHc COG2331 COG2928 Feature: gene Location: 20479-22038 bp Feature: domain Description: ubiB Location: 20482-22018 bp Feature: domain Description: ubiB Location: 20482-22018 bp Feature: gene Location: 21837-22640 bp Feature: domain Description: TPMT Location: 22077-22632 bp Feature: domain Description: TPMT Location: 22077-2263 2 bp Feature: gene Location: 23850-25445 bp Feature: domain Description: RVT_N Location: 23853-24045 bp Feature: domain Description: RVT_N Location: 23 853 -24045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24096-24732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24096-2473 2 bp Feature: domain Description: GIIM Note: maturase Location: 24786-25017 bp Feature: domain Description: GIIM Note: maturase Location: 24786-25017 bp Feature: domain Description: HNHc Note: nucleases Location: 25248-25401 bp Feature: domain Description: HNHc Note: nucleases Location: 25248-25401 bp Feature: gene Location: 25579-25890 bp Feature: domain Description: COG2331 Location: 25582-25804 bp Feature: domain Description: COG23 3 1 Location: 25582-25804 bp Feature: gene Location: 25932-26573 bp Feature: domain Description: COG2928 Location: 25947-26547 bp Feature: domain Description: COG2928 Location: 25947-26547 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SCRV01000056.1 (212513 bp)
Overview 1 RT 1: 185101-192793 bp Neighborhood of RT #1 [185101, 192813] SpoU PpsR RVT_N RVT-GII GIIM HNH PRK06464 YbbJ Feature: gene Location: 185101-185883 bp Feature: domain Description: SpoU Location: 185113-185875 bp Feature: domain Description: SpoU Location: 185113-185875 bp Feature: gene Location: 185906-186757 bp Feature: domain Description: PpsR Location: 185948-186749 bp Feature: domain Description: PpsR Location: 18594 8-18674 9 bp Feature: gene Location: 187894-189597 bp Feature: domain Description: RVT_N Location: 187951-188194 bp Feature: domain Description: RVT_N Location: 187951-188194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 188239-188887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 188239-188887 bp Feature: domain Description: GIIM Note: maturase Location: 188941-189172 bp Feature: domain Description: GIIM Note: maturase Location: 18894 1-189172 bp Feature: domain Description: HNH Note: nucleases Location: 189424-189559 bp Feature: domain Description: HNH Note: nucleases Location: 1894 24 -189559 bp Feature: gene Location: 189858-192251 bp Feature: domain Description: PRK06464 Location: 189885-192243 bp Feature: domain Description: PRK064 64 Location: 189885-19224 3 bp Feature: gene Location: 192373-192813 bp Feature: domain Description: YbbJ Location: 192379-192793 bp Feature: domain Description: YbbJ Location: 192379-192793 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT