myRT

myRT report for GCA_004299995.1_ASM429999v1

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Seq: SEXM01000061.1 (15864 bp)
Overview 1 RT 1: 2023-9210 bp Neighborhood of RT #1 [2023, 9210] RVT-GII HNHc AAA_10 Feature: gene Location: 2023-3282 bp Feature: gene Location: 3285-3434 bp Feature: gene Location: 3960-5762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4257-4956 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4257-4956 bp Feature: domain Description: HNHc Note: nucleases Location: 5511-5649 bp Feature: domain Description: HNHc Note: nucleases Location: 551 1 -5649 bp Feature: gene Location: 5802-7082 bp Feature: domain Description: AAA_10 Location: 5964-7047 bp Feature: domain Description: AAA_1 0 Location: 5964-7047 bp Feature: gene Location: 7087-9210 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), AAA_10 (pfam12846)

Seq: SEXM01000143.1 (2761 bp)
Overview 1 RT 1: 721-2512 bp Neighborhood of RT #1 [721, 2631] RVT-GII HNHc Feature: gene Location: 721-2631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-2512 bp Feature: domain Description: HNHc Note: nucleases Location: 2 347-2 512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: SEXM01000137.1 (3376 bp)
Overview 1 RT 1: 46-2675 bp Neighborhood of RT #1 [46, 3337] HsdM RVT-AbiP2 Feature: gene Location: 46-1524 bp Feature: domain Description: HsdM Location: 67-1492 bp Feature: domain Description: HsdM Location: 67-1492 bp Feature: gene Location: 1862-3337 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2210-2675 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2210-2675 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: SEXM01000050.1 (19388 bp)
Overview 1 RT 1: 10984-15655 bp Neighborhood of RT #1 [10984, 15666] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK Zeta_toxin Feature: gene Location: 10984-11319 bp Feature: domain Description: RelB_DinJ Location: 11188-11311 bp Feature: domain Description: RelB_DinJ Location: 11188-11311 bp Feature: gene Location: 11402-12418 bp Feature: domain Description: FtsK_SpoIIIE Location: 12053-12299 bp Feature: domain Description: FtsK_SpoIIIE Location: 12053-12299 bp Feature: gene Location: 13012-14886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13378-14074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13378-14 074 bp Feature: domain Description: HNHc Note: nucleases Location: 14614-14773 bp Feature: domain Description: HNHc Note: nucleases Location: 14 614 -14 773 bp Feature: gene Location: 14988-15332 bp Feature: domain Description: FtsK Location: 15000-15240 bp Feature: domain Description: FtsK Location: 15000-1524 0 bp Feature: gene Location: 15427-15666 bp Feature: domain Description: Zeta_toxin Location: 15526-15655 bp Feature: domain Description: Zeta_toxin Location: 15526-15655 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), RVT-GII, HNHc (smart00507), FtsK (COG1674), Zeta_toxin (pfam06414)

Seq: SEXM01000111.1 (4675 bp)
Overview 1 RT 1: 125-4672 bp Neighborhood of RT #1 [125, 4672] Glucosaminidase Peptidase_M23 RVT-GII HNHc Feature: gene Location: 125-1330 bp Feature: domain Description: Glucosaminidase Location: 401-797 bp Feature: domain Description: Glucosaminidase Location: 401-797 bp Feature: domain Description: Peptidase_M23 Location: 974-1211 bp Feature: domain Description: Peptidase_M23 Location: 974-1211 bp Feature: gene Location: 1330-1650 bp Feature: gene Location: 1838-3715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2153-2891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 215 3-2891 bp Feature: domain Description: HNHc Note: nucleases Location: 3449-3602 bp Feature: domain Description: HNHc Note: nucleases Location: 3449-3602 bp Feature: gene Location: 3902-4135 bp Feature: gene Location: 4403-4672 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551), RVT-GII, HNHc (smart00507)