myRT

myRT report for GCA_004300005.1_ASM430000v1

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Seq: SEXQ01000105.1 (3374 bp)
Overview 1 RT 1: 40-3299 bp Neighborhood of RT #1 [40, 3331] RVT-AbiP2 HsdM Feature: gene Location: 40-1515 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 388-853 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 388-853 bp Feature: gene Location: 1853-3331 bp Feature: domain Description: HsdM Location: 1874-3299 bp Feature: domain Description: HsdM Location: 1 874-3299 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)

Seq: SEXQ01000023.1 (39316 bp)
Overview 1 RT 1: 16069-21123 bp Neighborhood of RT #1 [16069, 21123] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 16069-16572 bp Feature: domain Description: ArdA Location: 16087-16558 bp Feature: domain Description: ArdA Location: 16087-16558 bp Feature: gene Location: 16574-16783 bp Feature: gene Location: 16913-18823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17246-17984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172 46-17984 bp Feature: domain Description: HNHc Note: nucleases Location: 18539-18704 bp Feature: domain Description: HNHc Note: nucleases Location: 18539-18704 bp Feature: gene Location: 19703-20887 bp Feature: domain Description: HTH_XRE Location: 19733-19877 bp Feature: domain Description: HTH_XRE Location: 19733-19877 bp Feature: domain Description: Rol_Rep_N Location: 19910-20174 bp Feature: domain Description: Rol_Rep_N Location: 19910-2 0174 bp Feature: domain Description: Rep_trans Location: 20198-20810 bp Feature: domain Description: Rep_trans Location: 2 0198-2 0810 bp Feature: gene Location: 20980-21123 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)

Seq: SEXQ01000033.1 (27703 bp)
Overview 1 RT 1: 15262-21115 bp Neighborhood of RT #1 [15262, 21234] VirB4 RVT-GII HNHc Glucosaminidase Peptidase_M23 Feature: gene Location: 15262-16956 bp Feature: domain Description: VirB4 Location: 15580-16264 bp Feature: domain Description: VirB4 Location: 15580-16264 bp Feature: gene Location: 17224-17457 bp Feature: gene Location: 17644-19521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17959-18697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17959-18697 bp Feature: domain Description: HNHc Note: nucleases Location: 19255-19408 bp Feature: domain Description: HNHc Note: nucleases Location: 19255-19408 bp Feature: gene Location: 19709-20029 bp Feature: gene Location: 20029-21234 bp Feature: domain Description: Glucosaminidase Location: 20305-20701 bp Feature: domain Description: Glucosaminidase Location: 203 05-20701 bp Feature: domain Description: Peptidase_M23 Location: 20878-21115 bp Feature: domain Description: Peptidase_M23 Location: 20878-21115 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4 (COG3451), RVT-GII, HNHc (smart00507), Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551)