myRT

myRT report for GCA_004300065.1_ASM430006v1

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Seq: SEXN01000026.1 (39254 bp)
Overview 1 RT 1: 17881-23234 bp Neighborhood of RT #1 [17881, 23248] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 17881-18171 bp Feature: gene Location: 18430-19614 bp Feature: domain Description: HTH_XRE Location: 18460-18604 bp Feature: domain Description: HTH_XRE Location: 1 8460-1 8604 bp Feature: domain Description: Rol_Rep_N Location: 18637-18901 bp Feature: domain Description: Rol_Rep_N Location: 1 8637-1 8901 bp Feature: domain Description: Rep_trans Location: 18925-19537 bp Feature: domain Description: Rep_trans Location: 1 8925-1 9537 bp Feature: gene Location: 20494-22404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20827-21565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20827-21 565 bp Feature: domain Description: HNHc Note: nucleases Location: 22120-22285 bp Feature: domain Description: HNHc Note: nucleases Location: 221 20-22285 bp Feature: gene Location: 22592-22732 bp Feature: gene Location: 22745-23248 bp Feature: domain Description: ArdA Location: 22763-23234 bp Feature: domain Description: ArdA Location: 22763-23234 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), RVT-GII, HNHc (smart00507), ArdA (pfam07275)

Seq: SEXN01000117.1 (3374 bp)
Overview 1 RT 1: 40-3299 bp Neighborhood of RT #1 [40, 3331] RVT-AbiP2 HsdM Feature: gene Location: 40-1515 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 388-853 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 388-853 bp Feature: gene Location: 1853-3331 bp Feature: domain Description: HsdM Location: 1874-3299 bp Feature: domain Description: HsdM Location: 1874-32 99 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)

Seq: SEXN01000032.1 (27892 bp)
Overview 1 RT 1: 15451-21304 bp Neighborhood of RT #1 [15451, 21423] VirB4 RVT-GII HNHc Glucosaminidase Peptidase_M23 Feature: gene Location: 15451-17145 bp Feature: domain Description: VirB4 Location: 15769-16453 bp Feature: domain Description: VirB4 Location: 15769-16453 bp Feature: gene Location: 17413-17646 bp Feature: gene Location: 17833-19710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18148-18886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18148-18886 bp Feature: domain Description: HNHc Note: nucleases Location: 19444-19597 bp Feature: domain Description: HNHc Note: nucleases Location: 19444-19597 bp Feature: gene Location: 19898-20218 bp Feature: gene Location: 20218-21423 bp Feature: domain Description: Glucosaminidase Location: 20494-20890 bp Feature: domain Description: Glucosaminidase Location: 20494-20890 bp Feature: domain Description: Peptidase_M23 Location: 21067-21304 bp Feature: domain Description: Peptidase_M23 Location: 21067-213 04 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4 (COG3451), RVT-GII, HNHc (smart00507), Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551)