myRT

myRT report for GCA_004300105.1_ASM430010v1

Download annotations/find similar RTs

Seq: SEXB01000031.1 (27892 bp)
Overview 1 RT 1: 6470-11750 bp Neighborhood of RT #1 [6470, 12442] Glucosaminidase Peptidase_M23 RVT-GII HNHc VirB4 Feature: gene Location: 6470-7675 bp Feature: domain Description: Glucosaminidase Location: 6746-7142 bp Feature: domain Description: Glucosaminidase Location: 6746-71 42 bp Feature: domain Description: Peptidase_M23 Location: 7319-7556 bp Feature: domain Description: Peptidase_M23 Location: 731 9-7556 bp Feature: gene Location: 7675-7995 bp Feature: gene Location: 8183-10060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8498-9236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8498-9236 bp Feature: domain Description: HNHc Note: nucleases Location: 9794-9947 bp Feature: domain Description: HNHc Note: nucleases Location: 9794-9947 bp Feature: gene Location: 10247-10480 bp Feature: gene Location: 10748-12442 bp Feature: domain Description: VirB4 Location: 11066-11750 bp Feature: domain Description: VirB4 Location: 1 1 066-1 1 750 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551), RVT-GII, HNHc (smart00507), VirB4 (COG3451)

Seq: SEXB01000109.1 (3374 bp)
Overview 1 RT 1: 40-3299 bp Neighborhood of RT #1 [40, 3331] RVT-AbiP2 HsdM Feature: gene Location: 40-1515 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 388-853 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 388-853 bp Feature: gene Location: 1853-3331 bp Feature: domain Description: HsdM Location: 1874-3299 bp Feature: domain Description: HsdM Location: 1874-32 99 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)

Seq: SEXB01000073.1 (9637 bp)
Overview 1 RT 1: 1940-6681 bp Neighborhood of RT #1 [1940, 6758] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 1940-2443 bp Feature: domain Description: ArdA Location: 1958-2429 bp Feature: domain Description: ArdA Location: 1958-2429 bp Feature: gene Location: 2445-2654 bp Feature: gene Location: 2784-4694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3117-3855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 117-3 855 bp Feature: domain Description: HNHc Note: nucleases Location: 4410-4575 bp Feature: domain Description: HNHc Note: nucleases Location: 4410-4575 bp Feature: gene Location: 5203-5352 bp Feature: gene Location: 5574-6758 bp Feature: domain Description: HTH_XRE Location: 5604-5748 bp Feature: domain Description: HTH_XRE Location: 5604-5748 bp Feature: domain Description: Rol_Rep_N Location: 5781-6045 bp Feature: domain Description: Rol_Rep_N Location: 5781-6045 bp Feature: domain Description: Rep_trans Location: 6069-6681 bp Feature: domain Description: Rep_trans Location: 6069-6681 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)