myRT

myRT report for GCA_004300185.1_ASM430018v1

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Seq: SEXP01000114.1 (3375 bp)
Overview 1 RT 1: 45-2674 bp Neighborhood of RT #1 [45, 3336] HsdM RVT-AbiP2 Feature: gene Location: 45-1523 bp Feature: domain Description: HsdM Location: 66-1491 bp Feature: domain Description: HsdM Location: 66-1 491 bp Feature: gene Location: 1861-3336 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2209-2674 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2209-2674 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: SEXP01000056.1 (15264 bp)
Overview 1 RT 1: 2825-8678 bp Neighborhood of RT #1 [2825, 8797] VirB4 RVT-GII HNHc Glucosaminidase Peptidase_M23 Feature: gene Location: 2825-4519 bp Feature: domain Description: VirB4 Location: 3143-3827 bp Feature: domain Description: VirB4 Location: 3143-382 7 bp Feature: gene Location: 4787-5020 bp Feature: gene Location: 5207-7084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5522-6260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 552 2 -62 60 bp Feature: domain Description: HNHc Note: nucleases Location: 6818-6971 bp Feature: domain Description: HNHc Note: nucleases Location: 6818-6971 bp Feature: gene Location: 7272-7592 bp Feature: gene Location: 7592-8797 bp Feature: domain Description: Glucosaminidase Location: 7868-8264 bp Feature: domain Description: Glucosaminidase Location: 7868-82 64 bp Feature: domain Description: Peptidase_M23 Location: 8441-8678 bp Feature: domain Description: Peptidase_M2 3 Location: 8441-8678 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4 (COG3451), RVT-GII, HNHc (smart00507), Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551)

Seq: SEXP01000024.1 (39316 bp)
Overview 1 RT 1: 17881-23234 bp Neighborhood of RT #1 [17881, 23248] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 17881-18171 bp Feature: gene Location: 18430-19614 bp Feature: domain Description: HTH_XRE Location: 18460-18604 bp Feature: domain Description: HTH_XRE Location: 18460-18604 bp Feature: domain Description: Rol_Rep_N Location: 18637-18901 bp Feature: domain Description: Rol_Rep_N Location: 1863 7-18901 bp Feature: domain Description: Rep_trans Location: 18925-19537 bp Feature: domain Description: Rep_trans Location: 18925-1953 7 bp Feature: gene Location: 20494-22404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20827-21565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20827-21565 bp Feature: domain Description: HNHc Note: nucleases Location: 22120-22285 bp Feature: domain Description: HNHc Note: nucleases Location: 22120-22285 bp Feature: gene Location: 22592-22732 bp Feature: gene Location: 22745-23248 bp Feature: domain Description: ArdA Location: 22763-23234 bp Feature: domain Description: ArdA Location: 22763 -23 23 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), RVT-GII, HNHc (smart00507), ArdA (pfam07275)