myRT

myRT report for GCA_004300395.1_ASM430039v1

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Seq: SEXV01000046.1 (21086 bp)
Overview 1 RT 1: 30-5310 bp Neighborhood of RT #1 [30, 6002] Glucosaminidase Peptidase_M23 RVT-GII HNHc VirB4 Feature: gene Location: 30-1235 bp Feature: domain Description: Glucosaminidase Location: 306-702 bp Feature: domain Description: Glucosaminidase Location: 306-702 bp Feature: domain Description: Peptidase_M23 Location: 879-1116 bp Feature: domain Description: Peptidase_M23 Location: 879-1 1 1 6 bp Feature: gene Location: 1235-1555 bp Feature: gene Location: 1743-3620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2058-2796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2058-2796 bp Feature: domain Description: HNHc Note: nucleases Location: 3354-3507 bp Feature: domain Description: HNHc Note: nucleases Location: 3354-3507 bp Feature: gene Location: 3807-4040 bp Feature: gene Location: 4308-6002 bp Feature: domain Description: VirB4 Location: 4626-5310 bp Feature: domain Description: VirB4 Location: 4626-531 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551), RVT-GII, HNHc (smart00507), VirB4 (COG3451)

Seq: SEXV01000008.1 (75946 bp)
Overview 1 RT 1: 36119-41688 bp Neighborhood of RT #1 [36119, 41708] Maff2 VirD4 RVT-GII VirD4 DUF3801 Feature: gene Location: 36119-36334 bp Feature: domain Description: Maff2 Location: 36122-36329 bp Feature: domain Description: Maff2 Location: 3612 2 -3632 9 bp Feature: gene Location: 36580-37563 bp Feature: domain Description: VirD4 Location: 36646-37462 bp Feature: domain Description: VirD4 Location: 36646-37462 bp Feature: gene Location: 37779-39686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38109-38853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38109-38853 bp Feature: gene Location: 40345-41148 bp Feature: domain Description: VirD4 Location: 40570-41110 bp Feature: domain Description: VirD4 Location: 40570-41110 bp Feature: gene Location: 41145-41708 bp Feature: domain Description: DUF3801 Location: 41328-41688 bp Feature: domain Description: DUF3801 Location: 4132 8-41688 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Maff2 (pfam12750), VirD4 (COG3505), RVT-GII, DUF3801 (pfam12687)

Seq: SEXV01000155.1 (1889 bp)
Overview 1 RT 1: 3-1074 bp Neighborhood of RT #1 [3, 1169] RVT-GII Feature: gene Location: 3-1169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 336-1074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 6-1074 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SEXV01000044.1 (22601 bp)
Overview 1 RT 1: 1956-7514 bp Neighborhood of RT #1 [1956, 7522] Dcm FtsK RVT-GII HNHc FtsK_SpoIIIE RelB_DinJ Feature: gene Location: 1956-3098 bp Feature: domain Description: Dcm Location: 1959-3072 bp Feature: domain Description: Dcm Location: 1959-3072 bp Feature: gene Location: 3143-3523 bp Feature: domain Description: FtsK Location: 3158-3398 bp Feature: domain Description: FtsK Location: 3158-3398 bp Feature: gene Location: 3625-5499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3991-4687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3991-4 687 bp Feature: domain Description: HNHc Note: nucleases Location: 5227-5386 bp Feature: domain Description: HNHc Note: nucleases Location: 5227-5386 bp Feature: gene Location: 6093-7124 bp Feature: domain Description: FtsK_SpoIIIE Location: 6765-7005 bp Feature: domain Description: FtsK_SpoIIIE Location: 6765-7005 bp Feature: gene Location: 7178-7522 bp Feature: domain Description: RelB_DinJ Location: 7388-7514 bp Feature: domain Description: RelB_DinJ Location: 7388-7514 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dcm (COG0270), FtsK (COG1674), RVT-GII, HNHc (smart00507), FtsK_SpoIIIE (pfam01580), RelB_DinJ (TIGR02384)

Seq: SEXV01000131.1 (3374 bp)
Overview 1 RT 1: 44-2673 bp Neighborhood of RT #1 [44, 3335] HsdM RVT-AbiP2 Feature: gene Location: 44-1522 bp Feature: domain Description: HsdM Location: 65-1490 bp Feature: domain Description: HsdM Location: 65 -1490 bp Feature: gene Location: 1860-3335 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2208-2673 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2208-2673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: SEXV01000154.1 (1901 bp)
Overview 1 RT 1: 77-1286 bp Neighborhood of RT #1 [77, 1465] RVT-GII GIIM Feature: gene Location: 77-1465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 398-1013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 398-1013 bp Feature: domain Description: GIIM Note: maturase Location: 1070-1286 bp Feature: domain Description: GIIM Note: maturase Location: 1070-1286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)