myRT

myRT report for GCA_004300425.1_ASM430042v1

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Seq: SEXU01000008.1 (75946 bp)
Overview 1 RT 1: 34239-39823 bp Neighborhood of RT #1 [34239, 39828] DUF3801 VirD4 RVT-GII VirD4 Maff2 Feature: gene Location: 34239-34802 bp Feature: domain Description: DUF3801 Location: 34422-34782 bp Feature: domain Description: DUF3801 Location: 34422-34782 bp Feature: gene Location: 34799-35602 bp Feature: domain Description: VirD4 Location: 35024-35564 bp Feature: domain Description: VirD4 Location: 35024-35564 bp Feature: gene Location: 36261-38168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36591-37335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36591 -37335 bp Feature: gene Location: 38384-39367 bp Feature: domain Description: VirD4 Location: 38450-39266 bp Feature: domain Description: VirD4 Location: 38450-39266 bp Feature: gene Location: 39613-39828 bp Feature: domain Description: Maff2 Location: 39616-39823 bp Feature: domain Description: Maff2 Location: 3961 6-39823 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3801 (pfam12687), VirD4 (COG3505), RVT-GII, Maff2 (pfam12750)

Seq: SEXU01000137.1 (3374 bp)
Overview 1 RT 1: 40-3299 bp Neighborhood of RT #1 [40, 3331] RVT-AbiP2 HsdM Feature: gene Location: 40-1515 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 388-853 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 388-853 bp Feature: gene Location: 1853-3331 bp Feature: domain Description: HsdM Location: 1874-3299 bp Feature: domain Description: HsdM Location: 1874-32 99 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)

Seq: SEXU01000158.1 (1901 bp)
Overview 1 RT 1: 77-1286 bp Neighborhood of RT #1 [77, 1465] RVT-GII GIIM Feature: gene Location: 77-1465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 398-1013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 98-1013 bp Feature: domain Description: GIIM Note: maturase Location: 1070-1286 bp Feature: domain Description: GIIM Note: maturase Location: 1070-1286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SEXU01000046.1 (21086 bp)
Overview 1 RT 1: 30-5310 bp Neighborhood of RT #1 [30, 6002] Glucosaminidase Peptidase_M23 RVT-GII HNHc VirB4 Feature: gene Location: 30-1235 bp Feature: domain Description: Glucosaminidase Location: 306-702 bp Feature: domain Description: Glucosaminidase Location: 306-702 bp Feature: domain Description: Peptidase_M23 Location: 879-1116 bp Feature: domain Description: Peptidase_M23 Location: 879-1116 bp Feature: gene Location: 1235-1555 bp Feature: gene Location: 1743-3620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2058-2796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2058-2796 bp Feature: domain Description: HNHc Note: nucleases Location: 3354-3507 bp Feature: domain Description: HNHc Note: nucleases Location: 3354 -3507 bp Feature: gene Location: 3807-4040 bp Feature: gene Location: 4308-6002 bp Feature: domain Description: VirB4 Location: 4626-5310 bp Feature: domain Description: VirB4 Location: 4 626-5310 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551), RVT-GII, HNHc (smart00507), VirB4 (COG3451)

Seq: SEXU01000159.1 (1889 bp)
Overview 1 RT 1: 3-1074 bp Neighborhood of RT #1 [3, 1169] RVT-GII Feature: gene Location: 3-1169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 336-1074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 336-1074 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SEXU01000044.1 (22601 bp)
Overview 1 RT 1: 1956-7514 bp Neighborhood of RT #1 [1956, 7522] Dcm FtsK RVT-GII HNHc FtsK_SpoIIIE RelB_DinJ Feature: gene Location: 1956-3098 bp Feature: domain Description: Dcm Location: 1959-3072 bp Feature: domain Description: Dcm Location: 1959-3072 bp Feature: gene Location: 3143-3523 bp Feature: domain Description: FtsK Location: 3158-3398 bp Feature: domain Description: FtsK Location: 3158-3398 bp Feature: gene Location: 3625-5499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3991-4687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3991-46 87 bp Feature: domain Description: HNHc Note: nucleases Location: 5227-5386 bp Feature: domain Description: HNHc Note: nucleases Location: 5227-5386 bp Feature: gene Location: 6093-7124 bp Feature: domain Description: FtsK_SpoIIIE Location: 6765-7005 bp Feature: domain Description: FtsK_SpoIIIE Location: 6 76 5-7005 bp Feature: gene Location: 7178-7522 bp Feature: domain Description: RelB_DinJ Location: 7388-7514 bp Feature: domain Description: RelB_DinJ Location: 7388-7514 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dcm (COG0270), FtsK (COG1674), RVT-GII, HNHc (smart00507), FtsK_SpoIIIE (pfam01580), RelB_DinJ (TIGR02384)