myRT

myRT report for GCA_004300525.1_ASM430052v1

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Seq: SEXL01000103.1 (3374 bp)
Overview 1 RT 1: 44-2673 bp Neighborhood of RT #1 [44, 3335] HsdM RVT-AbiP2 Feature: gene Location: 44-1522 bp Feature: domain Description: HsdM Location: 65-1490 bp Feature: domain Description: HsdM Location: 65-1 490 bp Feature: gene Location: 1860-3335 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2208-2673 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2208-2673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: SEXL01000024.1 (39316 bp)
Overview 1 RT 1: 17881-23234 bp Neighborhood of RT #1 [17881, 23248] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 17881-18171 bp Feature: gene Location: 18430-19614 bp Feature: domain Description: HTH_XRE Location: 18460-18604 bp Feature: domain Description: HTH_XRE Location: 18460-18604 bp Feature: domain Description: Rol_Rep_N Location: 18637-18901 bp Feature: domain Description: Rol_Rep_N Location: 18637-18901 bp Feature: domain Description: Rep_trans Location: 18925-19537 bp Feature: domain Description: Rep_trans Location: 1892 5-19537 bp Feature: gene Location: 20494-22404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20827-21565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 082 7-2 1565 bp Feature: domain Description: HNHc Note: nucleases Location: 22120-22285 bp Feature: domain Description: HNHc Note: nucleases Location: 2 2 12 0-2 2 2 85 bp Feature: gene Location: 22592-22732 bp Feature: gene Location: 22745-23248 bp Feature: domain Description: ArdA Location: 22763-23234 bp Feature: domain Description: ArdA Location: 2 2 763-2 32 34 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), RVT-GII, HNHc (smart00507), ArdA (pfam07275)

Seq: SEXL01000032.1 (27891 bp)
Overview 1 RT 1: 6470-11750 bp Neighborhood of RT #1 [6470, 12442] Glucosaminidase Peptidase_M23 RVT-GII HNHc VirB4 Feature: gene Location: 6470-7675 bp Feature: domain Description: Glucosaminidase Location: 6746-7142 bp Feature: domain Description: Glucosaminidase Location: 6746-7142 bp Feature: domain Description: Peptidase_M23 Location: 7319-7556 bp Feature: domain Description: Peptidase_M23 Location: 73 19-7556 bp Feature: gene Location: 7675-7995 bp Feature: gene Location: 8183-10060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8498-9236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8498-923 6 bp Feature: domain Description: HNHc Note: nucleases Location: 9794-9947 bp Feature: domain Description: HNHc Note: nucleases Location: 9794-9947 bp Feature: gene Location: 10247-10480 bp Feature: gene Location: 10748-12442 bp Feature: domain Description: VirB4 Location: 11066-11750 bp Feature: domain Description: VirB4 Location: 11066-11750 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551), RVT-GII, HNHc (smart00507), VirB4 (COG3451)