myRT

myRT report for GCA_004302885.1_ASM430288v1

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Seq: CP036156.1 (41388 bp)
Overview 1 RT 1: 28797-33706 bp Neighborhood of RT #1 [28797, 33706] Rve HsdM RVT-AbiP2 Tra8 Feature: gene Location: 28797-29483 bp Feature: domain Description: Rve Location: 28806-29454 bp Feature: domain Description: Rve Location: 28806-29454 bp Feature: gene Location: 29513-30718 bp Feature: domain Description: HsdM Location: 29534-30695 bp Feature: domain Description: HsdM Location: 29534-30695 bp Feature: gene Location: 31056-32531 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 31404-31869 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 31 404-31 869 bp Feature: gene Location: 32509-33462 bp Feature: domain Description: Tra8 Location: 32512-33439 bp Feature: domain Description: Tra8 Location: 3251 2-33439 bp Feature: gene Location: 33545-33706 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), HsdM (COG0286), RVT-AbiP2, Tra8 (COG2826)

Seq: CP036152.1 (172811 bp)
Overview 1 RT 1: 25397-31251 bp Neighborhood of RT #1 [25397, 31370] VirB4 RVT-GII HNHc Glucosaminidase Peptidase_M23 Feature: gene Location: 25397-27091 bp Feature: domain Description: VirB4 Location: 25715-26399 bp Feature: domain Description: VirB4 Location: 2 5715-2 6399 bp Feature: gene Location: 27360-27593 bp Feature: gene Location: 27780-29657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28095-28833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 8095-2 8833 bp Feature: domain Description: HNHc Note: nucleases Location: 29391-29544 bp Feature: domain Description: HNHc Note: nucleases Location: 2 9391-2 9544 bp Feature: gene Location: 29845-30165 bp Feature: gene Location: 30165-31370 bp Feature: domain Description: Glucosaminidase Location: 30441-30837 bp Feature: domain Description: Glucosaminidase Location: 30441-30837 bp Feature: domain Description: Peptidase_M23 Location: 31014-31251 bp Feature: domain Description: Peptidase_M2 3 Location: 31014-312 51 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4 (COG3451), RVT-GII, HNHc (smart00507), Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551)

Seq: CP036154.1 (61681 bp)
Overview 1 RT 1: 7619-13519 bp 2 RT 2: 36965-42806 bp Neighborhood of RT #1 [7619, 13632] TOPRIM_TopoIA_TopoIII RVT-GII HNHc PRK07726 YdjM Neighborhood of RT #2 [36965, 42835] VirB4 RVT-GII HNHc CwlT_like Spr Feature: gene Location: 7619-7981 bp Feature: gene Location: 8051-8428 bp Feature: domain Description: TOPRIM_TopoIA_TopoIII Location: 8060-8417 bp Feature: domain Description: TOPRIM_TopoIA_TopoIII Location: 8060-8417 bp Feature: gene Location: 9165-11051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9480-10218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9480-10218 bp Feature: domain Description: HNHc Note: nucleases Location: 10770-10935 bp Feature: domain Description: HNHc Note: nucleases Location: 10770-1093 5 bp Feature: gene Location: 11259-12935 bp Feature: domain Description: PRK07726 Location: 11271-12762 bp Feature: domain Description: PRK07726 Location: 11271-12762 bp Feature: gene Location: 13063-13632 bp Feature: domain Description: YdjM Location: 13066-13519 bp Feature: domain Description: YdjM Location: 13 066-13 519 bp Feature: gene Location: 36965-38590 bp Feature: domain Description: VirB4 Location: 37304-37898 bp Feature: domain Description: VirB4 Location: 3 73 04-3 7898 bp Feature: gene Location: 38859-39092 bp Feature: gene Location: 39279-41156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39594-40332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 9594-403 3 2 bp Feature: domain Description: HNHc Note: nucleases Location: 40890-41043 bp Feature: domain Description: HNHc Note: nucleases Location: 40890-41043 bp Feature: gene Location: 41344-41664 bp Feature: gene Location: 41684-42835 bp Feature: domain Description: CwlT_like Location: 41942-42419 bp Feature: domain Description: CwlT_like Location: 41942-42419 bp Feature: domain Description: Spr Location: 42443-42806 bp Feature: domain Description: Spr Location: 42443 -42806 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TOPRIM_TopoIA_TopoIII (cd03362), RVT-GII, HNHc (smart00507), PRK07726 (DNA topoisomerase 3), YdjM (pfam04307), VirB4 (COG3451), CwlT_like, Spr (COG0791)