myRT

myRT report for GCA_004303135.1_ASM430313v1

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Seq: SIQZ01000008.1 (177948 bp)
Overview 1 RT 1: 157025-160532 bp Neighborhood of RT #1 [157025, 160532] DDE_Tnp_IS240 DDE_Tnp_IS66_C RVT-GII Rve Feature: gene Location: 157025-157444 bp Feature: domain Description: DDE_Tnp_IS240 Location: 157070-157358 bp Feature: domain Description: DDE_Tnp_IS240 Location: 1 57070-1 57358 bp Feature: gene Location: 157502-157639 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 157511-157607 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 5751 1 -1 57607 bp Feature: gene Location: 157741-159564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 158479-159169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 58479-1 591 69 bp Feature: gene Location: 160102-160251 bp Feature: domain Description: Rve Location: 160105-160249 bp Feature: domain Description: Rve Location: 1 601 05-1 60249 bp Feature: gene Location: 160305-160532 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS240 (pfam13610), DDE_Tnp_IS66_C (pfam13817), RVT-GII, Rve (COG3316)

Seq: SIQZ01000001.1 (4965595 bp)
Overview 1 RT 1: 3041000-3046621 bp Neighborhood of RT #1 [3041000, 3046650] DUF3732 RVT-Retrons MviM Feature: gene Location: 3041000-3041488 bp Feature: gene Location: 3041488-3043458 bp Feature: domain Description: DUF3732 Location: 3042886-3043414 bp Feature: domain Description: DUF3732 Location: 3042 886-3043414 bp Feature: gene Location: 3043663-3045387 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3043795-3044434 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3043795-3044434 bp Feature: gene Location: 3045546-3045842 bp Feature: gene Location: 3045841-3046650 bp Feature: domain Description: MviM Location: 3045847-3046621 bp Feature: domain Description: MviM Location: 3045847-304662 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3732 (pfam12532), RVT-Retrons, MviM (COG0673)

Seq: SIQZ01000003.1 (555578 bp)
Overview 1 RT 1: 132740-140621 bp Neighborhood of RT #1 [132740, 140621] PRK14975 PRK14975 RVT-UG9 N6_Mtase N6_Mtase Feature: gene Location: 132740-133432 bp Feature: gene Location: 134056-135648 bp Feature: domain Description: PRK14975 Location: 134149-134650 bp Feature: domain Description: PRK14975 Location: 13 4149-13 4650 bp Feature: domain Description: PRK14975 Location: 134848-135583 bp Feature: domain Description: PRK14975 Location: 13 4848-13 5583 bp Feature: gene Location: 135641-137302 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 135848-136499 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 13 5848-13 6499 bp Feature: gene Location: 137474-140038 bp Feature: domain Description: N6_Mtase Location: 138029-138257 bp Feature: domain Description: N6_Mtase Location: 13 8029-13 8257 bp Feature: domain Description: N6_Mtase Location: 138395-138479 bp Feature: domain Description: N6_Mtase Location: 13 83 95-13 8479 bp Feature: gene Location: 140385-140621 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK14975 (bifunctional 3'-5' exonuclease/DNA polymerase; Provisional), RVT-UG9, N6_Mtase (pfam02384)