myRT

myRT report for GCA_004303885.1_ASM430388v1

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Seq: SIPI01000010.1 (33573 bp)
Overview 1 RT 1: 30975-33119 bp Neighborhood of RT #1 [30975, 33514] DDE_Tnp_IS240 DDE_Tnp_IS66_C RVT-GII Feature: gene Location: 30975-31394 bp Feature: domain Description: DDE_Tnp_IS240 Location: 31020-31308 bp Feature: domain Description: DDE_Tnp_IS240 Location: 31 020-31 308 bp Feature: gene Location: 31452-31589 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 31461-31557 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 31 461 -31 557 bp Feature: gene Location: 31691-33514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32429-33119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32429-331 1 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS240 (pfam13610), DDE_Tnp_IS66_C (pfam13817), RVT-GII

Seq: SIPI01000012.1 (19131 bp)
Overview 1 RT 1: 39-3899 bp Neighborhood of RT #1 [39, 3907] RVT-GII nodJ PRK13536 Feature: gene Location: 39-1862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777-1467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777-1467 bp Feature: gene Location: 2094-2882 bp Feature: domain Description: nodJ Location: 2130-2874 bp Feature: domain Description: nodJ Location: 2 130-2 874 bp Feature: gene Location: 2879-3907 bp Feature: domain Description: PRK13536 Location: 2948-3899 bp Feature: domain Description: PRK13536 Location: 2 948-3899 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, nodJ (TIGR01291), PRK13536 (nodulation factor ABC transporter ATP-binding protein NodI)

Seq: SIPI01000008.1 (50852 bp)
Overview 1 RT 1: 37099-40648 bp Neighborhood of RT #1 [37099, 40648] DDE_Tnp_IS66_C RVT-GII Rve Feature: gene Location: 37099-37452 bp Feature: gene Location: 37574-37825 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 37586-37697 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3 7586-3 7697 bp Feature: gene Location: 37836-39659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38574-39264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 8574-3 9264 bp Feature: gene Location: 40197-40346 bp Feature: domain Description: Rve Location: 40200-40344 bp Feature: domain Description: Rve Location: 40200-403 44 bp Feature: gene Location: 40400-40648 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), RVT-GII, Rve (COG3316)

Seq: SIPI01000001.1 (5102181 bp)
Overview 1 RT 1: 4967268-4972006 bp Neighborhood of RT #1 [4967268, 4972006] KAP_NTPase KAP_NTPase RVT-AbiP2 Feature: gene Location: 4967268-4967465 bp Feature: gene Location: 4967915-4969726 bp Feature: domain Description: KAP_NTPase Location: 4967936-4968062 bp Feature: domain Description: KAP_NTPase Location: 4 967936-4 968062 bp Feature: domain Description: KAP_NTPase Location: 4968266-4968524 bp Feature: domain Description: KAP_NTPase Location: 4 968266-4 968524 bp Feature: gene Location: 4969985-4971481 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 4970402-4970849 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 4 9704 02-4 97084 9 bp Feature: gene Location: 4971588-4971830 bp Feature: gene Location: 4971848-4972006 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KAP_NTPase (pfam07693), RVT-AbiP2