myRT

myRT report for GCA_004304165.1_ASM430416v1

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Seq: SIPM01000018.1 (50868 bp)
Overview 1 RT 1: 41173-50821 bp Neighborhood of RT #1 [41173, 50865] DDE_Tnp_IS66 DDE_Tnp_IS66 DDE_Tnp_IS66 RVT-GII IstB_IS21_ATP IstB_IS21 COG4584 COG4584 RVT-GII TIR_2 pfam13191 TPR_12 Feature: gene Location: 41173-42843 bp Feature: domain Description: DDE_Tnp_IS66 Location: 41707-42076 bp Feature: domain Description: DDE_Tnp_IS66 Location: 41 707-42076 bp Feature: domain Description: DDE_Tnp_IS66 Location: 42283-42694 bp Feature: domain Description: DDE_Tnp_IS66 Location: 42283-42694 bp Feature: gene Location: 43067-43558 bp Feature: domain Description: DDE_Tnp_IS66 Location: 43160-43415 bp Feature: domain Description: DDE_Tnp_IS66 Location: 431 60-4341 5 bp Feature: gene Location: 44309-44701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44471-44624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44471 -44624 bp Feature: gene Location: 44727-45503 bp Feature: domain Description: IstB_IS21_ATP Location: 44799-44880 bp Feature: domain Description: IstB_IS21 _ATP Location: 44799-44880 bp Feature: domain Description: IstB_IS21 Location: 44886-45420 bp Feature: domain Description: IstB_IS21 Location: 44886-45420 bp Feature: gene Location: 45517-47070 bp Feature: domain Description: COG4584 Location: 45655-46444 bp Feature: domain Description: COG4584 Location: 45655-46444 bp Feature: domain Description: COG4584 Location: 46453-47062 bp Feature: domain Description: COG4584 Location: 46453-47062 bp Feature: gene Location: 47158-47469 bp Feature: gene Location: 47487-47774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47502-47721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47502-47721 bp Feature: gene Location: 47782-48036 bp Feature: gene Location: 48412-50865 bp Feature: domain Description: TIR_2 Location: 48424-48766 bp Feature: domain Description: TIR_2 Location: 48424-48766 bp Feature: domain Description: pfam13191 Location: 48904-49297 bp Feature: domain Description: pfam1 31 91 Location: 48904-49297 bp Feature: domain Description: TPR_12 Location: 50626-50821 bp Feature: domain Description: TPR_1 2 Location: 50626-50821 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), COG4584 (Transposase ), TIR_2 (pfam13676), pfam13191 (AAA_16;AAA ATPase domain), TPR_12 (pfam13424)