myRT

myRT report for GCA_004304635.1_ASM430463v1

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Seq: SIOW01000001.1 (4834038 bp)
Overview 1 RT 1: 2356942-2360906 bp 2 RT 2: 2961317-2968057 bp Neighborhood of RT #1 [2356942, 2360923] TnpB_IS66 HTH_Tnp_1 RVT-UG7 LysR Neighborhood of RT #2 [2961317, 2968266] SIR2_2 OYE_like_FMN RVT-UG12 YjgR YjgR SIR2_2 Feature: gene Location: 2356942-2357295 bp Feature: domain Description: TnpB_IS66 Location: 2356969-2357260 bp Feature: domain Description: TnpB_IS66 Location: 2356969-2357260 bp Feature: gene Location: 2357292-2357681 bp Feature: domain Description: HTH_Tnp_1 Location: 2357346-2357505 bp Feature: domain Description: HTH_Tnp_1 Location: 2357346-2357505 bp Feature: gene Location: 2357749-2359245 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2358040-2358451 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2358040-2358451 bp Feature: gene Location: 2359355-2359987 bp Feature: gene Location: 2360048-2360923 bp Feature: domain Description: LysR Location: 2360051-2360906 bp Feature: domain Description: LysR Location: 2360051 -2360906 bp Feature: gene Location: 2961317-2962456 bp Feature: domain Description: SIR2_2 Location: 2961833-2962346 bp Feature: domain Description: SIR2_2 Location: 2961 833-2962346 bp Feature: gene Location: 2962224-2963018 bp Feature: domain Description: OYE_like_FMN Location: 2962227-2962482 bp Feature: domain Description: OYE_like_FMN Location: 2962227-2962482 bp Feature: gene Location: 2963147-2964463 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 2963201-2963606 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 2963201 -2963606 bp Feature: gene Location: 2964899-2966977 bp Feature: domain Description: YjgR Location: 2965256-2965640 bp Feature: domain Description: YjgR Location: 2965256-2965640 bp Feature: domain Description: YjgR Location: 2966378-2966888 bp Feature: domain Description: YjgR Location: 2966378-2966888 bp Feature: gene Location: 2966974-2968266 bp Feature: domain Description: SIR2_2 Location: 2967532-2968057 bp Feature: domain Description: SIR2_2 Location: 2967532-2968057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), HTH_Tnp_1 (pfam01527), RVT-UG7, LysR (COG0583), SIR2_2 (pfam13289), OYE_like_FMN (cd02933), RVT-UG12, YjgR (COG0433)

Seq: SIOW01000013.1 (20008 bp)
Overview 1 RT 1: 12139-14945 bp Neighborhood of RT #1 [12139, 14945] BON RVT-GII Rve group_II_RT_mat RVT-GII Feature: gene Location: 12139-12456 bp Feature: domain Description: BON Location: 12172-12361 bp Feature: domain Description: BON Location: 12 172 -12 361 bp Feature: gene Location: 12487-12615 bp Feature: gene Location: 12680-13852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12740-13031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 740-13031 bp Feature: domain Description: Rve Location: 13529-13784 bp Feature: domain Description: Rve Location: 1352 9-13784 bp Feature: gene Location: 13849-14241 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 13969-14014 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 13969-14014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14014-14239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14014-142 39 bp Feature: gene Location: 14282-14695 bp Feature: gene Location: 14745-14945 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BON (smart00749), RVT-GII, Rve (COG3316), group_II_RT_mat (TIGR04416)