myRT

myRT report for GCA_004304665.1_ASM430466v1

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Seq: SIMQ01000007.1 (206323 bp)
Overview 1 RT 1: 2-2806 bp Neighborhood of RT #1 [2, 2814] RVT-GII GIIM nodJ PRK13536 Feature: gene Location: 2-769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-374 bp Feature: domain Description: GIIM Note: maturase Location: 455-662 bp Feature: domain Description: GIIM Note: maturase Location: 455-662 bp Feature: gene Location: 1001-1789 bp Feature: domain Description: nodJ Location: 1037-1781 bp Feature: domain Description: nodJ Location: 1 037-1 781 bp Feature: gene Location: 1786-2814 bp Feature: domain Description: PRK13536 Location: 1855-2806 bp Feature: domain Description: PRK1 3536 Location: 1 855-2806 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), nodJ (TIGR01291), PRK13536 (nodulation factor ABC transporter ATP-binding protein NodI)

Seq: SIMQ01000001.1 (5062592 bp)
Overview 1 RT 1: 1553324-1560011 bp Neighborhood of RT #1 [1553324, 1560011] RVT-UG1 couple_hipB Feature: gene Location: 1553324-1554445 bp Feature: gene Location: 1554442-1554864 bp Feature: gene Location: 1555329-1559159 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 1556055-1556541 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 1556055-1556541 bp Feature: gene Location: 1559349-1559621 bp Feature: domain Description: couple_hipB Location: 1559367-1559514 bp Feature: domain Description: couple_hipB Location: 1559367-1559514 bp Feature: gene Location: 1559808-1560011 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG1, couple_hipB (TIGR03070)

Seq: SIMQ01000023.1 (1523 bp)
Overview 1 RT 1: 3-1357 bp Neighborhood of RT #1 [3, 1464] IstB_IS21 RVT-GII GIIM Feature: gene Location: 3-590 bp Feature: domain Description: IstB_IS21 Location: 9-507 bp Feature: domain Description: IstB_IS21 Location: 9-507 bp Feature: gene Location: 772-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 775-1069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 775-1069 bp Feature: domain Description: GIIM Note: maturase Location: 1150-1357 bp Feature: domain Description: GIIM Note: maturase Location: 1150-13 57 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IstB_IS21 (pfam01695), RVT-GII, GIIM (pfam08388)

Seq: SIMQ01000018.1 (2385 bp)
Overview 1 RT 1: 2-2273 bp Neighborhood of RT #1 [2, 2347] COG4584 COG4584 RVT-GII Feature: gene Location: 2-1162 bp Feature: domain Description: COG4584 Location: 188-986 bp Feature: domain Description: COG4 584 Location: 188-986 bp Feature: domain Description: COG4584 Location: 989-1157 bp Feature: domain Description: COG4 584 Location: 989-1157 bp Feature: gene Location: 1202-2347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1940-2273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 194 0-2273 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4584 (Transposase ), RVT-GII

Seq: SIMQ01000002.1 (888472 bp)
Overview 1 RT 1: 788103-793475 bp Neighborhood of RT #1 [788103, 793627] KOG0628 Acetyltransf_10 RVT-GII AzoR Feature: gene Location: 788103-789533 bp Feature: domain Description: KOG0628 Location: 788106-789519 bp Feature: domain Description: KOG0628 Location: 788106-7895 19 bp Feature: gene Location: 789923-790723 bp Feature: domain Description: Acetyltransf_10 Location: 790436-790700 bp Feature: domain Description: Acetyltransf_10 Location: 790436-790700 bp Feature: gene Location: 791338-792612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 791845-792535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 791845 -7925 35 bp Feature: gene Location: 792715-793047 bp Feature: gene Location: 793166-793627 bp Feature: domain Description: AzoR Location: 793172-793475 bp Feature: domain Description: AzoR Location: 793172-793475 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG0628 (KOG0628, Aromatic-L-amino-acid/L-histidine decarboxylase ), Acetyltransf_10 (pfam13673), RVT-GII, AzoR (COG1182)

Seq: SIMQ01000009.1 (72633 bp)
Overview 1 RT 1: 10909-13558 bp Neighborhood of RT #1 [10909, 13558] Rve RVT-GII GIIM Feature: gene Location: 10909-11157 bp Feature: gene Location: 11211-11360 bp Feature: domain Description: Rve Location: 11214-11358 bp Feature: domain Description: Rve Location: 11214-11358 bp Feature: gene Location: 11898-12779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12015-12384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12015-12384 bp Feature: domain Description: GIIM Note: maturase Location: 12465-12672 bp Feature: domain Description: GIIM Note: maturase Location: 1246 5-126 72 bp Feature: gene Location: 12818-12973 bp Feature: gene Location: 12989-13558 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), RVT-GII, GIIM (pfam08388)

Seq: SIMQ01000021.1 (1921 bp)
Overview 1 RT 1: 39-1467 bp Neighborhood of RT #1 [39, 1862] RVT-GII Feature: gene Location: 39-1862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777-1467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7 7 7 -1467 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII