myRT

myRT report for GCA_004304735.1_ASM430473v1

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Seq: SIOB01000001.1 (5599678 bp)
Overview 1 RT 1: 1147215-1150595 bp 2 RT 2: 1442361-1447810 bp 3 RT 3: 5170851-5178001 bp Neighborhood of RT #1 [1147215, 1150606] RVT-GII GIIM endolysin_R21_like Neighborhood of RT #2 [1442361, 1447810] SLATT_5 RVT-UG12 PinE Neighborhood of RT #3 [5170851, 5178072] Cys_rich_FGFR Cys_rich_FGFR Cys_rich_FGFR RVT-GII GIIM 2A0602 RND_mfp Feature: gene Location: 1147215-1147751 bp Feature: gene Location: 1147922-1148392 bp Feature: gene Location: 1148230-1149708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1148641-1149331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 48641 -1 1 49331 bp Feature: domain Description: GIIM Note: maturase Location: 1149409-1149625 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 49409-1 1 49625 bp Feature: gene Location: 1149913-1150167 bp Feature: gene Location: 1150142-1150606 bp Feature: domain Description: endolysin_R21_like Location: 1150172-1150595 bp Feature: domain Description: endolysin_R21 _like Location: 1 1 501 72-1 1 50595 bp Feature: gene Location: 1442361-1443503 bp Feature: gene Location: 1443848-1444513 bp Feature: domain Description: SLATT_5 Location: 1443935-1444478 bp Feature: domain Description: SLATT_5 Location: 1 443935-1 444478 bp Feature: gene Location: 1444524-1446260 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 1445004-1445406 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 1 445004-1 445406 bp Feature: gene Location: 1446618-1447235 bp Feature: domain Description: PinE Location: 1446630-1447179 bp Feature: domain Description: PinE Location: 1 446630-1 4471 79 bp Feature: gene Location: 1447616-1447810 bp Feature: gene Location: 5170851-5171651 bp Feature: domain Description: Cys_rich_FGFR Location: 5171004-5171091 bp Feature: domain Description: Cys_rich_FGFR Location: 51 71 004-51 71 091 bp Feature: domain Description: Cys_rich_FGFR Location: 5171250-5171337 bp Feature: domain Description: Cys_rich_FGFR Location: 51 71 250-51 71 337 bp Feature: domain Description: Cys_rich_FGFR Location: 5171514-5171610 bp Feature: domain Description: Cys_rich_FGFR Location: 51 71 51 4-51 71 61 0 bp Feature: gene Location: 5171796-5172266 bp Feature: gene Location: 5172104-5173582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5172515-5173205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 7251 5-51 73205 bp Feature: domain Description: GIIM Note: maturase Location: 5173283-5173499 bp Feature: domain Description: GIIM Note: maturase Location: 51 73283-51 73499 bp Feature: gene Location: 5173661-5176831 bp Feature: domain Description: 2A0602 Location: 5173670-5176763 bp Feature: domain Description: 2A0602 Location: 51 73670-51 76763 bp Feature: gene Location: 5176873-5178072 bp Feature: domain Description: RND_mfp Location: 5176990-5178001 bp Feature: domain Description: RND_mfp Location: 51 76990-51 78001 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), endolysin_R21_like, SLATT_5 (pfam18160), RVT-UG12, PinE (COG1961), Cys_rich_FGFR (pfam00839), 2A0602 (TIGR00915), RND_mfp (TIGR01730)

Seq: SIOB01000012.1 (39061 bp)
Overview 1 RT 1: 30303-33019 bp Neighborhood of RT #1 [30303, 33114] YAcAr PhdYeFM_antitox RVT-GII GIIM Rve BON Feature: gene Location: 30303-31166 bp Feature: domain Description: YAcAr Location: 30813-31011 bp Feature: domain Description: YAcAr Location: 30813-31011 bp Feature: gene Location: 31186-31509 bp Feature: domain Description: PhdYeFM_antitox Location: 31252-31390 bp Feature: domain Description: PhdYeFM_antitox Location: 312 52 -31390 bp Feature: gene Location: 31534-31935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31543-31678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31543-31678 bp Feature: domain Description: GIIM Note: maturase Location: 31759-31933 bp Feature: domain Description: GIIM Note: maturase Location: 31759-31933 bp Feature: gene Location: 31868-32380 bp Feature: domain Description: Rve Location: 32141-32330 bp Feature: domain Description: Rve Location: 32 141-32 330 bp Feature: gene Location: 32797-33114 bp Feature: domain Description: BON Location: 32830-33019 bp Feature: domain Description: BON Location: 32 830-33019 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YAcAr, PhdYeFM_antitox (pfam02604), RVT-GII, GIIM (pfam08388), Rve (COG3316), BON (smart00749)