myRT

myRT report for GCA_004304755.1_ASM430475v1

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Seq: SINW01000021.1 (9864 bp)
Overview 1 RT 1: 3-9807 bp Neighborhood of RT #1 [3, 9863] DDE_Tnp_IS66 DDE_Tnp_IS66 DDE_Tnp_IS66 RVT-GII IstB_IS21_ATP IstB_IS21 COG4584 COG4584 RVT-GII TIR_2 pfam13191 TPR_12 TPR_12 Feature: gene Location: 3-1661 bp Feature: domain Description: DDE_Tnp_IS66 Location: 537-906 bp Feature: domain Description: DDE_Tnp_IS66 Location: 537-906 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1113-1524 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 1 1 3-1 524 bp Feature: gene Location: 1885-2376 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1975-2233 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 975-2233 bp Feature: gene Location: 3127-3519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3289-3442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3289-3442 bp Feature: gene Location: 3545-4321 bp Feature: domain Description: IstB_IS21_ATP Location: 3617-3698 bp Feature: domain Description: IstB_IS21 _ATP Location: 361 7-3698 bp Feature: domain Description: IstB_IS21 Location: 3704-4238 bp Feature: domain Description: IstB_IS21 Location: 3704-4238 bp Feature: gene Location: 4335-5936 bp Feature: domain Description: COG4584 Location: 4521-5310 bp Feature: domain Description: COG4584 Location: 4521 -531 0 bp Feature: domain Description: COG4584 Location: 5322-5928 bp Feature: domain Description: COG4584 Location: 5322-5928 bp Feature: gene Location: 5976-6287 bp Feature: gene Location: 6305-6592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6320-6539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6320-6539 bp Feature: gene Location: 6600-6854 bp Feature: gene Location: 7230-9863 bp Feature: domain Description: TIR_2 Location: 7242-7584 bp Feature: domain Description: TIR_2 Location: 7242-7584 bp Feature: domain Description: pfam13191 Location: 7722-8115 bp Feature: domain Description: pfam1 31 91 Location: 7722-81 1 5 bp Feature: domain Description: TPR_12 Location: 9444-9639 bp Feature: domain Description: TPR_1 2 Location: 9444-9639 bp Feature: domain Description: TPR_12 Location: 9720-9807 bp Feature: domain Description: TPR_1 2 Location: 9720-9807 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), COG4584 (Transposase ), TIR_2 (pfam13676), pfam13191 (AAA_16;AAA ATPase domain), TPR_12 (pfam13424)