myRT

myRT report for GCA_004304775.1_ASM430477v1

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Seq: SIND01000015.1 (2962 bp)
Overview 1 RT 1: 92-2509 bp Neighborhood of RT #1 [92, 2904] COG3415 DDE_3 RVT-GII Feature: gene Location: 92-538 bp Feature: domain Description: COG3415 Location: 95-437 bp Feature: domain Description: COG341 5 Location: 95-437 bp Feature: gene Location: 438-1034 bp Feature: domain Description: DDE_3 Location: 525-942 bp Feature: domain Description: DDE_3 Location: 525-942 bp Feature: gene Location: 1081-2904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1819-2509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 81 9-2509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SIND01000011.1 (6832 bp)
Overview 1 RT 1: 59-6379 bp Neighborhood of RT #1 [59, 6774] RVT-GII LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C TnpB_IS66 InsE RVT-GII Feature: gene Location: 59-1882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 797-1487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 797-1487 bp Feature: gene Location: 1980-2156 bp Feature: gene Location: 2399-3994 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2516-2747 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2 516-2 747 bp Feature: domain Description: zf-IS66 Location: 2774-2900 bp Feature: domain Description: zf-IS66 Location: 2 774-2 900 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2963-3830 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 963-3830 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3851-3962 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3851-3962 bp Feature: gene Location: 4049-4303 bp Feature: domain Description: TnpB_IS66 Location: 4052-4265 bp Feature: domain Description: TnpB_IS66 Location: 4052 -42 65 bp Feature: gene Location: 4383-4838 bp Feature: domain Description: InsE Location: 4422-4584 bp Feature: domain Description: InsE Location: 442 2 -4584 bp Feature: gene Location: 4951-6774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5689-6379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5689-6379 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SIND01000009.1 (28974 bp)
Overview 1 RT 1: 9998-16571 bp Neighborhood of RT #1 [9998, 16597] PRK08255 BCL_4HBCL BCL_4HBCL RVT-GII RVT-GII BCL_4HBCL Feature: gene Location: 9998-11521 bp Feature: domain Description: PRK08255 Location: 10001-11069 bp Feature: domain Description: PRK08255 Location: 10001-11069 bp Feature: domain Description: BCL_4HBCL Location: 11180-11486 bp Feature: domain Description: BCL_4HBCL Location: 11180-11486 bp Feature: gene Location: 11515-12093 bp Feature: domain Description: BCL_4HBCL Location: 11527-12082 bp Feature: domain Description: BCL_4HBCL Location: 11527-12082 bp Feature: gene Location: 12141-13964 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12879-13569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12879-13 569 bp Feature: gene Location: 14115-15938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14853-15543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14853 -15543 bp Feature: gene Location: 16004-16150 bp Feature: gene Location: 16133-16597 bp Feature: domain Description: BCL_4HBCL Location: 16136-16571 bp Feature: domain Description: BCL_4HBCL Location: 1613 6-16571 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SIND01000001.1 (5020473 bp)
Overview 1 RT 1: 2999288-3004196 bp 2 RT 2: 3534327-3539942 bp Neighborhood of RT #1 [2999288, 3004196] VasI RVT-CRISPR-like Neighborhood of RT #2 [3534327, 3539944] SBP56 RVT-GII NuoJ NuoK Feature: gene Location: 2999288-2999821 bp Feature: domain Description: VasI Location: 2999441-2999804 bp Feature: domain Description: VasI Location: 29994 4 1-2999804 bp Feature: gene Location: 2999940-3000386 bp Feature: gene Location: 3000607-3001998 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3001054-3001546 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3001054 -300154 6 bp Feature: gene Location: 3002468-3003217 bp Feature: gene Location: 3003273-3004196 bp Feature: gene Location: 3534327-3534995 bp Feature: gene Location: 3535020-3536420 bp Feature: domain Description: SBP56 Location: 3535035-3536406 bp Feature: domain Description: SBP56 Location: 3535035-35364 06 bp Feature: gene Location: 3536652-3538475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3537390-3538080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3537390-3538080 bp Feature: gene Location: 3539142-3539642 bp Feature: domain Description: NuoJ Location: 3539151-3539634 bp Feature: domain Description: NuoJ Location: 3539151-3539634 bp Feature: gene Location: 3539642-3539944 bp Feature: domain Description: NuoK Location: 3539645-3539942 bp Feature: domain Description: NuoK Location: 353964 5-353994 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SIND01000008.1 (64857 bp)
Overview 1 RT 1: 30313-37586 bp Neighborhood of RT #1 [30313, 37586] RVT-GII RVT-GII Feature: gene Location: 30313-30462 bp Feature: gene Location: 30784-31185 bp Feature: gene Location: 31991-33814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32729-33419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32729-33419 bp Feature: gene Location: 33965-35788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34703-35393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34703-35 393 bp Feature: gene Location: 36274-36975 bp Feature: gene Location: 37302-37586 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SIND01000005.1 (320824 bp)
Overview 1 RT 1: 303435-306942 bp Neighborhood of RT #1 [303435, 306942] DDE_Tnp_IS240 DDE_Tnp_IS66_C RVT-GII Rve Feature: gene Location: 303435-303854 bp Feature: domain Description: DDE_Tnp_IS240 Location: 303480-303768 bp Feature: domain Description: DDE_Tnp_IS240 Location: 303480-30376 8 bp Feature: gene Location: 303912-304049 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 303921-304017 bp Feature: domain Description: DDE_Tnp_IS6 6 _C Location: 303921-304017 bp Feature: gene Location: 304151-305974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 304889-305579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 304889-305579 bp Feature: gene Location: 306356-306661 bp Feature: domain Description: Rve Location: 306359-306611 bp Feature: domain Description: Rve Location: 306 359-306 6 11 bp Feature: gene Location: 306715-306942 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT