myRT

myRT report for GCA_004304905.1_ASM430490v1

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Seq: SINB01000004.1 (613487 bp)
Overview 1 RT 1: 20875-33207 bp Neighborhood of RT #1 [20875, 33207] CHAT RVT-GII TIR_2 AAA_16 WD40 WD40 7WD40 RVT-GII Feature: gene Location: 20875-23682 bp Feature: domain Description: CHAT Location: 21763-22669 bp Feature: domain Description: CHAT Location: 21 763-22669 bp Feature: gene Location: 24122-24277 bp Feature: gene Location: 24030-24665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24420-24522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24420-24522 bp Feature: gene Location: 24673-29457 bp Feature: domain Description: TIR_2 Location: 25033-25387 bp Feature: domain Description: TIR_2 Location: 25033-25387 bp Feature: domain Description: AAA_16 Location: 25504-25894 bp Feature: domain Description: AAA_1 6 Location: 25504-25894 bp Feature: domain Description: WD40 Location: 27085-27451 bp Feature: domain Description: WD40 Location: 27085-27451 bp Feature: domain Description: WD40 Location: 27679-28444 bp Feature: domain Description: WD40 Location: 27679-28444 bp Feature: domain Description: 7WD40 Location: 28918-29131 bp Feature: domain Description: 7WD40 Location: 2891 8-291 31 bp Feature: gene Location: 30246-30677 bp Feature: gene Location: 30788-32050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30992-31676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30992-31 676 bp Feature: gene Location: 32355-32774 bp Feature: gene Location: 32854-33207 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHAT (pfam12770), RVT-GII, TIR_2 (pfam13676), AAA_16 (pfam13191), WD40 (smart00320), 7WD40 (sd00039)

Seq: SINB01000003.1 (654279 bp)
Overview 1 RT 1: 302826-309326 bp Neighborhood of RT #1 [302826, 309391] N6_Mtase N6_Mtase RVT-UG9 PRK14975 PRK14975 Feature: gene Location: 302826-303062 bp Feature: gene Location: 303409-305973 bp Feature: domain Description: N6_Mtase Location: 303964-304192 bp Feature: domain Description: N6_Mtase Location: 303964-304192 bp Feature: domain Description: N6_Mtase Location: 304330-304414 bp Feature: domain Description: N6_Mtase Location: 304330-304414 bp Feature: gene Location: 306145-307395 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 306352-307003 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 306352 -307003 bp Feature: gene Location: 307423-307806 bp Feature: gene Location: 307799-309391 bp Feature: domain Description: PRK14975 Location: 307892-308393 bp Feature: domain Description: PRK14975 Location: 307892 -308393 bp Feature: domain Description: PRK14975 Location: 308591-309326 bp Feature: domain Description: PRK14975 Location: 308591-30932 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), RVT-UG9, PRK14975 (bifunctional 3'-5' exonuclease/DNA polymerase; Provisional)

Seq: SINB01000005.1 (256415 bp)
Overview 1 RT 1: 247542-250963 bp Neighborhood of RT #1 [247542, 251049] Rve RVT-GII DDE_Tnp_IS66_C DDE_Tnp_IS240 Feature: gene Location: 247542-247769 bp Feature: gene Location: 247823-247972 bp Feature: domain Description: Rve Location: 247826-247970 bp Feature: domain Description: Rve Location: 247826-247970 bp Feature: gene Location: 248510-250333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 249248-249938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 249248-24993 8 bp Feature: gene Location: 250435-250572 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 250444-250540 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 250444-250540 bp Feature: gene Location: 250630-251049 bp Feature: domain Description: DDE_Tnp_IS240 Location: 250675-250963 bp Feature: domain Description: DDE_Tnp_IS240 Location: 250675-250963 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), RVT-GII, DDE_Tnp_IS66_C (pfam13817), DDE_Tnp_IS240 (pfam13610)