myRT

myRT report for GCA_004304935.1_ASM430493v1

Download annotations/find similar RTs

Seq: SINT01000009.1 (51242 bp)
Overview 1 RT 1: 1-1692 bp Neighborhood of RT #1 [1, 1778] RVT-GII DDE_Tnp_IS66_C DDE_Tnp_IS240 Feature: gene Location: 1-1062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 739-1063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 739-1 063 bp Feature: gene Location: 1164-1301 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1173-1269 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 1 73-1 269 bp Feature: gene Location: 1359-1778 bp Feature: domain Description: DDE_Tnp_IS240 Location: 1404-1692 bp Feature: domain Description: DDE_Tnp_IS240 Location: 1 404-1 692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SINT01000007.1 (206250 bp)
Overview 1 RT 1: 2-2806 bp Neighborhood of RT #1 [2, 2814] RVT-GII GIIM nodJ PRK13536 Feature: gene Location: 2-769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-374 bp Feature: domain Description: GIIM Note: maturase Location: 455-662 bp Feature: domain Description: GIIM Note: maturase Location: 455-662 bp Feature: gene Location: 1001-1789 bp Feature: domain Description: nodJ Location: 1037-1781 bp Feature: domain Description: nodJ Location: 1037-1781 bp Feature: gene Location: 1786-2814 bp Feature: domain Description: PRK13536 Location: 1855-2806 bp Feature: domain Description: PRK13536 Location: 1855-2 806 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SINT01000002.1 (837890 bp)
Overview 1 RT 1: 734327-739699 bp Neighborhood of RT #1 [734327, 739851] KOG0628 Acetyltransf_10 RVT-GII AzoR Feature: gene Location: 734327-735757 bp Feature: domain Description: KOG0628 Location: 734330-735743 bp Feature: domain Description: KOG0628 Location: 73 43 3 0-73 5743 bp Feature: gene Location: 736147-736947 bp Feature: domain Description: Acetyltransf_10 Location: 736660-736924 bp Feature: domain Description: Acetyltransf_10 Location: 73 6660-73 6924 bp Feature: gene Location: 737562-738836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 738069-738759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73 8069-73 8759 bp Feature: gene Location: 738939-739271 bp Feature: gene Location: 739390-739851 bp Feature: domain Description: AzoR Location: 739396-739699 bp Feature: domain Description: AzoR Location: 73 93 96-73 9699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SINT01000028.1 (247 bp)
Overview 1 RT 1: 2-242 bp Neighborhood of RT #1 [2, 244] RVT-GII Feature: gene Location: 2-244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-24 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SINT01000001.1 (5347021 bp)
Overview 1 RT 1: 644799-649743 bp 2 RT 2: 3909326-3913610 bp Neighborhood of RT #1 [644799, 649826] Aes RpoE RVT-GII COG4584 COG4584 IstB_IS21_ATP IstB_IS21 Neighborhood of RT #2 [3909326, 3913610] SBP56 RVT-GII GIIM DUF883 Feature: gene Location: 644799-645770 bp Feature: domain Description: Aes Location: 644898-645756 bp Feature: domain Description: Aes Location: 644898-645 75 6 bp Feature: gene Location: 645935-646219 bp Feature: domain Description: RpoE Location: 645944-646205 bp Feature: domain Description: RpoE Location: 645 944-646205 bp Feature: gene Location: 646250-647395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 646988-647321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 646988-647321 bp Feature: gene Location: 647516-649036 bp Feature: domain Description: COG4584 Location: 647621-648419 bp Feature: domain Description: COG45 84 Location: 647621-648419 bp Feature: domain Description: COG4584 Location: 648422-649028 bp Feature: domain Description: COG45 84 Location: 648422-649028 bp Feature: gene Location: 649077-649826 bp Feature: domain Description: IstB_IS21_ATP Location: 649122-649203 bp Feature: domain Description: IstB_IS21_ATP Location: 649122-649203 bp Feature: domain Description: IstB_IS21 Location: 649209-649743 bp Feature: domain Description: IstB_IS21 Location: 649209-649743 bp Feature: gene Location: 3909326-3909994 bp Feature: gene Location: 3910019-3911419 bp Feature: domain Description: SBP56 Location: 3910034-3911405 bp Feature: domain Description: SBP5 6 Location: 3910034-3911405 bp Feature: gene Location: 3911651-3912388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3911660-3911993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3911660-3911993 bp Feature: domain Description: GIIM Note: maturase Location: 3912074-3912281 bp Feature: domain Description: GIIM Note: maturase Location: 3912074-3912281 bp Feature: gene Location: 3912927-3913265 bp Feature: domain Description: DUF883 Location: 3912963-3913227 bp Feature: domain Description: DUF883 Location: 3912963-3913227 bp Feature: gene Location: 3913404-3913610 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SINT01000021.1 (2889 bp)
Overview 1 RT 1: 1-2586 bp Neighborhood of RT #1 [1, 2618] RVT-GII HTH_28 HTH_28 PHA02517 Feature: gene Location: 1-1062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 739-1063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 739-106 3 bp Feature: gene Location: 1252-1785 bp Feature: domain Description: HTH_28 Location: 1276-1414 bp Feature: domain Description: HTH_28 Location: 1276 -1414 bp Feature: domain Description: HTH_28 Location: 1441-1603 bp Feature: domain Description: HTH_28 Location: 1441-16 03 bp Feature: gene Location: 1860-2618 bp Feature: domain Description: PHA02517 Location: 1875-2586 bp Feature: domain Description: PHA02517 Location: 1875-2586 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SINT01000008.1 (77175 bp)
Overview 1 RT 1: 16998-19870 bp Neighborhood of RT #1 [16998, 19870] Rve RVT-GII GIIM Feature: gene Location: 16998-17183 bp Feature: gene Location: 17523-17672 bp Feature: domain Description: Rve Location: 17526-17670 bp Feature: domain Description: Rve Location: 17 526-17 67 0 bp Feature: gene Location: 18210-19091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18327-18696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18327 -18696 bp Feature: domain Description: GIIM Note: maturase Location: 18777-18984 bp Feature: domain Description: GIIM Note: maturase Location: 187 7 7 -18984 bp Feature: gene Location: 19130-19285 bp Feature: gene Location: 19301-19870 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SINT01000019.1 (3383 bp)
Overview 1 RT 1: 60-3218 bp Neighborhood of RT #1 [60, 3325] COG4584 COG4584 IstB_IS21_ATP IstB_IS21 RVT-GII GIIM Feature: gene Location: 60-1661 bp Feature: domain Description: COG4584 Location: 246-1044 bp Feature: domain Description: COG458 4 Location: 246-1044 bp Feature: domain Description: COG4584 Location: 1047-1653 bp Feature: domain Description: COG458 4 Location: 1047-1653 bp Feature: gene Location: 1675-2451 bp Feature: domain Description: IstB_IS21_ATP Location: 1747-1828 bp Feature: domain Description: IstB_IS21_ATP Location: 1747-18 28 bp Feature: domain Description: IstB_IS21 Location: 1834-2368 bp Feature: domain Description: IstB_IS21 Location: 18 34-2368 bp Feature: gene Location: 2588-3325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2597-2930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2597-2930 bp Feature: domain Description: GIIM Note: maturase Location: 3011-3218 bp Feature: domain Description: GIIM Note: maturase Location: 3011-3218 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT