myRT

myRT report for GCA_004304975.1_ASM430497v1

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Seq: SINO01000008.1 (71787 bp)
Overview 1 RT 1: 10909-13558 bp Neighborhood of RT #1 [10909, 13558] Rve RVT-GII GIIM Feature: gene Location: 10909-11157 bp Feature: gene Location: 11211-11360 bp Feature: domain Description: Rve Location: 11214-11358 bp Feature: domain Description: Rve Location: 1 1 21 4-1 1 358 bp Feature: gene Location: 11898-12779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12015-12384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 201 5-1 2384 bp Feature: domain Description: GIIM Note: maturase Location: 12465-12672 bp Feature: domain Description: GIIM Note: maturase Location: 1 2465-1 2672 bp Feature: gene Location: 12818-12973 bp Feature: gene Location: 12989-13558 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SINO01000020.1 (1921 bp)
Overview 1 RT 1: 39-1467 bp Neighborhood of RT #1 [39, 1862] RVT-GII Feature: gene Location: 39-1862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777-1467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777-1467 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SINO01000009.1 (62327 bp)
Overview 1 RT 1: 59514-62219 bp Neighborhood of RT #1 [59514, 62326] PRK13536 nodJ RVT-GII GIIM Feature: gene Location: 59514-60542 bp Feature: domain Description: PRK13536 Location: 59583-60534 bp Feature: domain Description: PRK13 53 6 Location: 59583 -6053 4 bp Feature: gene Location: 60539-61327 bp Feature: domain Description: nodJ Location: 60575-61319 bp Feature: domain Description: nodJ Location: 60575-613 19 bp Feature: gene Location: 61559-62326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61562-61931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61562-6193 1 bp Feature: domain Description: GIIM Note: maturase Location: 62012-62219 bp Feature: domain Description: GIIM Note: maturase Location: 62012-62219 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SINO01000014.1 (3721 bp)
Overview 1 RT 1: 107-3609 bp Neighborhood of RT #1 [107, 3683] IstB_IS21_ATP IstB_IS21 COG4584 COG4584 RVT-GII Feature: gene Location: 107-883 bp Feature: domain Description: IstB_IS21_ATP Location: 179-260 bp Feature: domain Description: IstB_IS21_ATP Location: 179-260 bp Feature: domain Description: IstB_IS21 Location: 266-800 bp Feature: domain Description: IstB_IS21 Location: 266-800 bp Feature: gene Location: 897-2498 bp Feature: domain Description: COG4584 Location: 1083-1881 bp Feature: domain Description: COG4 584 Location: 1083-1881 bp Feature: domain Description: COG4584 Location: 1884-2490 bp Feature: domain Description: COG4 584 Location: 1884 -24 90 bp Feature: gene Location: 2538-3683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3276-3609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3276-3609 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SINO01000002.1 (833542 bp)
Overview 1 RT 1: 94098-96623 bp Neighborhood of RT #1 [94098, 96623] AzoR RVT-GII Feature: gene Location: 94098-94559 bp Feature: domain Description: AzoR Location: 94104-94407 bp Feature: domain Description: AzoR Location: 94104-94407 bp Feature: gene Location: 94678-95010 bp Feature: gene Location: 95113-96291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95524-96214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95 5 24-96214 bp Feature: gene Location: 95581-96270 bp Feature: gene Location: 96288-96623 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SINO01000011.1 (47199 bp)
Overview 1 RT 1: 1-1692 bp Neighborhood of RT #1 [1, 1778] RVT-GII DDE_Tnp_IS66_C DDE_Tnp_IS240 Feature: gene Location: 1-1062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 739-1063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 739-106 3 bp Feature: gene Location: 1164-1301 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1173-1269 bp Feature: domain Description: DDE_Tnp_IS6 6 _C Location: 1173-126 9 bp Feature: gene Location: 1359-1778 bp Feature: domain Description: DDE_Tnp_IS240 Location: 1404-1692 bp Feature: domain Description: DDE_Tnp_IS240 Location: 1404-16 92 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SINO01000001.1 (5021476 bp)
Overview 1 RT 1: 3026150-3031067 bp 2 RT 2: 3580804-3585088 bp Neighborhood of RT #1 [3026150, 3031067] RVT-CRISPR-like PRK09672 Neighborhood of RT #2 [3580804, 3585088] SBP56 RVT-GII GIIM DUF883 Feature: gene Location: 3026150-3026821 bp Feature: gene Location: 3027006-3027452 bp Feature: gene Location: 3027792-3029183 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3028239-3028731 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3028239-30287 31 bp Feature: gene Location: 3029458-3030285 bp Feature: domain Description: PRK09672 Location: 3029581-3029971 bp Feature: domain Description: PRK0967 2 Location: 3029581-302997 1 bp Feature: gene Location: 3030891-3031067 bp Feature: gene Location: 3580804-3581472 bp Feature: gene Location: 3581497-3582897 bp Feature: domain Description: SBP56 Location: 3581512-3582883 bp Feature: domain Description: SBP56 Location: 3581512-3582883 bp Feature: gene Location: 3583129-3583866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3583138-3583471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3583138-358347 1 bp Feature: domain Description: GIIM Note: maturase Location: 3583552-3583759 bp Feature: domain Description: GIIM Note: maturase Location: 3583552-35837 59 bp Feature: gene Location: 3584405-3584743 bp Feature: domain Description: DUF883 Location: 3584441-3584705 bp Feature: domain Description: DUF883 Location: 3584441-35847 05 bp Feature: gene Location: 3584882-3585088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SINO01000016.1 (3384 bp)
Overview 1 RT 1: 60-3218 bp Neighborhood of RT #1 [60, 3325] COG4584 COG4584 IstB_IS21_ATP IstB_IS21 RVT-GII GIIM Feature: gene Location: 60-1661 bp Feature: domain Description: COG4584 Location: 246-1044 bp Feature: domain Description: COG458 4 Location: 246-1044 bp Feature: domain Description: COG4584 Location: 1047-1653 bp Feature: domain Description: COG458 4 Location: 1047-1653 bp Feature: gene Location: 1675-2451 bp Feature: domain Description: IstB_IS21_ATP Location: 1747-1828 bp Feature: domain Description: IstB_IS21_ATP Location: 1747-18 28 bp Feature: domain Description: IstB_IS21 Location: 1834-2368 bp Feature: domain Description: IstB_IS21 Location: 18 34-2368 bp Feature: gene Location: 2588-3325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2597-2930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2597-2930 bp Feature: domain Description: GIIM Note: maturase Location: 3011-3218 bp Feature: domain Description: GIIM Note: maturase Location: 3011-3218 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SINO01000018.1 (2858 bp)
Overview 1 RT 1: 1-2586 bp Neighborhood of RT #1 [1, 2618] RVT-GII HTH_28 HTH_28 PHA02517 Feature: gene Location: 1-1062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 739-1063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 739 -1063 bp Feature: gene Location: 1252-1785 bp Feature: domain Description: HTH_28 Location: 1276-1414 bp Feature: domain Description: HTH_28 Location: 1276-1414 bp Feature: domain Description: HTH_28 Location: 1441-1603 bp Feature: domain Description: HTH_28 Location: 1441-1603 bp Feature: gene Location: 1860-2618 bp Feature: domain Description: PHA02517 Location: 1875-2586 bp Feature: domain Description: PHA02517 Location: 1875-2586 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT