myRT

myRT report for GCA_004305295.1_ASM430529v1

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Seq: SIMS01000011.1 (4919 bp)
Overview 1 RT 1: 2136-4466 bp Neighborhood of RT #1 [2136, 4861] TnpB_IS66 InsE RVT-GII Feature: gene Location: 2136-2390 bp Feature: domain Description: TnpB_IS66 Location: 2139-2352 bp Feature: domain Description: TnpB_IS66 Location: 21 39-2352 bp Feature: gene Location: 2470-2925 bp Feature: domain Description: InsE Location: 2509-2671 bp Feature: domain Description: InsE Location: 2509-2671 bp Feature: gene Location: 3038-4861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3776-4466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3776-4466 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SIMS01000007.1 (147420 bp)
Overview 1 RT 1: 135454-139871 bp Neighborhood of RT #1 [135454, 139909] HTH_Tnp_1 Tra5 RVT-GII InsE TnpB_IS66 Feature: gene Location: 135454-135720 bp Feature: domain Description: HTH_Tnp_1 Location: 135460-135667 bp Feature: domain Description: HTH_Tnp_1 Location: 135460-135667 bp Feature: gene Location: 135764-136642 bp Feature: domain Description: Tra5 Location: 135773-136535 bp Feature: domain Description: Tra5 Location: 135773-136535 bp Feature: gene Location: 137090-138913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 137828-138518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13782 8-138518 bp Feature: gene Location: 139120-139575 bp Feature: domain Description: InsE Location: 139159-139321 bp Feature: domain Description: InsE Location: 139159-13932 1 bp Feature: gene Location: 139655-139909 bp Feature: domain Description: TnpB_IS66 Location: 139658-139871 bp Feature: domain Description: TnpB_IS66 Location: 139658-139871 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SIMS01000012.1 (4919 bp)
Overview 1 RT 1: 59-3962 bp Neighborhood of RT #1 [59, 3994] RVT-GII LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 59-1882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 797-1487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 797-1487 bp Feature: gene Location: 1980-2156 bp Feature: gene Location: 2399-3994 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2516-2747 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2516-2747 bp Feature: domain Description: zf-IS66 Location: 2774-2900 bp Feature: domain Description: zf-IS66 Location: 2774-2900 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2963-3830 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2963 -3 83 0 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3851-3962 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3 851-3 962 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SIMS01000005.1 (123915 bp)
Overview 1 RT 1: 76059-79480 bp Neighborhood of RT #1 [76059, 79566] Rve RVT-GII DDE_Tnp_IS66_C DDE_Tnp_IS240 Feature: gene Location: 76059-76286 bp Feature: gene Location: 76340-76489 bp Feature: domain Description: Rve Location: 76343-76487 bp Feature: domain Description: Rve Location: 7634 3-764 87 bp Feature: gene Location: 77027-78850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77765-78455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77765-784 55 bp Feature: gene Location: 78952-79089 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 78961-79057 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 78961-79057 bp Feature: gene Location: 79147-79566 bp Feature: domain Description: DDE_Tnp_IS240 Location: 79192-79480 bp Feature: domain Description: DDE_Tnp_IS24 0 Location: 79192-794 80 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SIMS01000001.1 (5531224 bp)
Overview 1 RT 1: 2972823-2979997 bp 2 RT 2: 3562255-3567870 bp Neighborhood of RT #1 [2972823, 2980029] RMtype1_S_Eco16444ORF1681_TRD1-CR1_like RMtype1_S_Eco16444ORF1681_TRD1-CR1_like SIR2-like RVT-GII LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C Neighborhood of RT #2 [3562255, 3567872] SBP56 RVT-GII NuoJ NuoK Feature: gene Location: 2972823-2974574 bp Feature: domain Description: RMtype1_S_Eco16444ORF1681_TRD1-CR1_like Location: 2973435-2973693 bp Feature: domain Description: RMtype1_S_Eco16444ORF1681_TRD1-CR1_like Location: 2973435 -2973693 bp Feature: domain Description: RMtype1_S_Eco16444ORF1681_TRD1-CR1_like Location: 2973999-2974548 bp Feature: domain Description: RMtype1_S_Eco16444ORF1681_TRD1-CR1_like Location: 2973999-29745 48 bp Feature: gene Location: 2974571-2975710 bp Feature: domain Description: SIR2-like Location: 2974913-2975579 bp Feature: domain Description: SIR2-like Location: 2974913-2975 5 79 bp Feature: gene Location: 2976000-2977823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2976738-2977428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2976738-2977428 bp Feature: gene Location: 2978015-2978191 bp Feature: gene Location: 2978434-2980029 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2978551-2978782 bp Feature: domain Description: LZ_Tnp_IS66 Location: 29785 5 1-2978782 bp Feature: domain Description: zf-IS66 Location: 2978809-2978935 bp Feature: domain Description: zf-IS66 Location: 2978809-2978935 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2978998-2979865 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2978998-2979865 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2979886-2979997 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2979886-2979997 bp Feature: gene Location: 3562255-3562923 bp Feature: gene Location: 3562948-3564348 bp Feature: domain Description: SBP56 Location: 3562963-3564334 bp Feature: domain Description: SBP5 6 Location: 35 62963-35 64334 bp Feature: gene Location: 3564580-3566403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3565318-3566008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35 65 318-35 66008 bp Feature: gene Location: 3567070-3567570 bp Feature: domain Description: NuoJ Location: 3567079-3567562 bp Feature: domain Description: NuoJ Location: 35 67079-35 675 62 bp Feature: gene Location: 3567570-3567872 bp Feature: domain Description: NuoK Location: 3567573-3567870 bp Feature: domain Description: NuoK Location: 35 675 73-35 67870 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT