myRT

myRT report for GCA_004305605.1_ASM430560v1

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Seq: SIMN01000001.1 (5390555 bp)
Overview 1 RT 1: 2812144-2816642 bp 2 RT 2: 4143406-4151488 bp Neighborhood of RT #1 [2812144, 2816728] PRK13536 nodJ RVT-GII DDE_Tnp_IS66_C DDE_Tnp_IS240 Neighborhood of RT #2 [4143406, 4151488] YbjD YbjD UvrD UvrD RVT-UG12 Feature: gene Location: 2812144-2813172 bp Feature: domain Description: PRK13536 Location: 2812213-2813164 bp Feature: domain Description: PRK1 3536 Location: 281 221 3-281 31 64 bp Feature: gene Location: 2813169-2813957 bp Feature: domain Description: nodJ Location: 2813205-2813949 bp Feature: domain Description: nodJ Location: 281 3205-281 3949 bp Feature: gene Location: 2814189-2816012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2814927-2815617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 281 4927-281 561 7 bp Feature: gene Location: 2816114-2816251 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2816123-2816219 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 281 61 23-281 621 9 bp Feature: gene Location: 2816309-2816728 bp Feature: domain Description: DDE_Tnp_IS240 Location: 2816354-2816642 bp Feature: domain Description: DDE_Tnp_IS240 Location: 281 6354-281 6642 bp Feature: gene Location: 4143406-4145415 bp Feature: domain Description: YbjD Location: 4143409-4143607 bp Feature: domain Description: YbjD Location: 41 43409-41 43607 bp Feature: domain Description: YbjD Location: 4144234-4144846 bp Feature: domain Description: YbjD Location: 41 44234-41 44846 bp Feature: gene Location: 4145412-4147268 bp Feature: domain Description: UvrD Location: 4145502-4146612 bp Feature: domain Description: UvrD Location: 41 45502-41 4661 2 bp Feature: domain Description: UvrD Location: 4146924-4147257 bp Feature: domain Description: UvrD Location: 41 46924-41 47257 bp Feature: gene Location: 4147286-4148989 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 4147691-4148120 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 41 47691 -41 481 20 bp Feature: gene Location: 4149138-4150130 bp Feature: gene Location: 4150451-4151488 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13536 (nodulation factor ABC transporter ATP-binding protein NodI), nodJ (TIGR01291), RVT-GII, DDE_Tnp_IS66_C (pfam13817), DDE_Tnp_IS240 (pfam13610), YbjD (COG3593), UvrD (COG0210), RVT-UG12

Seq: SIMN01000006.1 (73993 bp)
Overview 1 RT 1: 58710-62583 bp Neighborhood of RT #1 [58710, 62583] DDE_Tnp_IS66_C RVT-GII Rve Feature: gene Location: 58710-59063 bp Feature: gene Location: 59185-59436 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 59197-59308 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 59197-59308 bp Feature: gene Location: 59447-61270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60185-60875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60185-60875 bp Feature: gene Location: 61808-61957 bp Feature: domain Description: Rve Location: 61811-61955 bp Feature: domain Description: Rve Location: 61811-61955 bp Feature: gene Location: 62290-62583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), RVT-GII, Rve (COG3316)

Seq: SIMN01000004.1 (621709 bp)
Overview 1 RT 1: 228588-231455 bp Neighborhood of RT #1 [228588, 231455] group_II_RT_mat RVT-GII Feature: gene Location: 228588-228881 bp Feature: gene Location: 228895-229152 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 228901-229057 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 228901-229057 bp Feature: gene Location: 229369-230124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 229573-230077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 229573 -23 0077 bp Feature: gene Location: 230429-230848 bp Feature: gene Location: 230931-231455 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII