myRT

myRT report for GCA_004305615.1_ASM430561v1

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Seq: SINN01000002.1 (886960 bp)
Overview 1 RT 1: 94094-97589 bp Neighborhood of RT #1 [94094, 97600] AzoR RVT-GII IS5 group_II_RT_mat Feature: gene Location: 94094-94555 bp Feature: domain Description: AzoR Location: 94100-94403 bp Feature: domain Description: AzoR Location: 941 00-94403 bp Feature: gene Location: 94674-95006 bp Feature: gene Location: 95109-95798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95112-95721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 951 1 2-95721 bp Feature: gene Location: 95966-97057 bp Feature: domain Description: IS5 Location: 96161-97034 bp Feature: domain Description: IS5 Location: 961 61 -97034 bp Feature: gene Location: 97121-97600 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 97367-97589 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 97367-97589 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SINN01000007.1 (78271 bp)
Overview 1 RT 1: 63276-65925 bp Neighborhood of RT #1 [63276, 65925] RVT-GII GIIM Rve Feature: gene Location: 63276-63845 bp Feature: gene Location: 63861-64016 bp Feature: gene Location: 64055-64936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64172-64541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64172 -64541 bp Feature: domain Description: GIIM Note: maturase Location: 64622-64829 bp Feature: domain Description: GIIM Note: maturase Location: 6462 2 -6482 9 bp Feature: gene Location: 65474-65623 bp Feature: domain Description: Rve Location: 65477-65621 bp Feature: domain Description: Rve Location: 65477-6562 1 bp Feature: gene Location: 65677-65925 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SINN01000023.1 (1921 bp)
Overview 1 RT 1: 39-1467 bp Neighborhood of RT #1 [39, 1862] RVT-GII Feature: gene Location: 39-1862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777-1467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777-1467 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SINN01000001.1 (5086695 bp)
Overview 1 RT 1: 3625146-3629131 bp 2 RT 2: 3847333-3852573 bp Neighborhood of RT #1 [3625146, 3629131] SBP56 RVT-GII GIIM Neighborhood of RT #2 [3847333, 3852573] XerC HTH_17 RVT-CRISPR-like Feature: gene Location: 3625146-3625814 bp Feature: gene Location: 3625839-3627239 bp Feature: domain Description: SBP56 Location: 3625854-3627225 bp Feature: domain Description: SBP56 Location: 3625854 -3627225 bp Feature: gene Location: 3627471-3628352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3627588-3627957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3627588-3627957 bp Feature: domain Description: GIIM Note: maturase Location: 3628038-3628245 bp Feature: domain Description: GIIM Note: maturase Location: 3628038-362824 5 bp Feature: gene Location: 3628391-3628546 bp Feature: gene Location: 3628562-3629131 bp Feature: gene Location: 3847333-3848520 bp Feature: domain Description: XerC Location: 3847585-3848470 bp Feature: domain Description: XerC Location: 384 7585-384 84 70 bp Feature: gene Location: 3848517-3848951 bp Feature: domain Description: HTH_17 Location: 3848679-3848811 bp Feature: domain Description: HTH_17 Location: 384 8679-384 8811 bp Feature: gene Location: 3849238-3850626 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3849670-3850102 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 384 9670-3850102 bp Feature: gene Location: 3851337-3852110 bp Feature: gene Location: 3852115-3852573 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SINN01000008.1 (48640 bp)
Overview 1 RT 1: 1-1692 bp Neighborhood of RT #1 [1, 1778] RVT-GII DDE_Tnp_IS66_C DDE_Tnp_IS240 Feature: gene Location: 1-1062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 739-1063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 739-1063 bp Feature: gene Location: 1164-1301 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1173-1269 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1173-1269 bp Feature: gene Location: 1359-1778 bp Feature: domain Description: DDE_Tnp_IS240 Location: 1404-1692 bp Feature: domain Description: DDE_Tnp_IS240 Location: 1404-1692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SINN01000020.1 (3384 bp)
Overview 1 RT 1: 60-3218 bp Neighborhood of RT #1 [60, 3325] COG4584 COG4584 IstB_IS21_ATP IstB_IS21 RVT-GII GIIM Feature: gene Location: 60-1661 bp Feature: domain Description: COG4584 Location: 246-1044 bp Feature: domain Description: COG4584 Location: 246 -1044 bp Feature: domain Description: COG4584 Location: 1047-1653 bp Feature: domain Description: COG4584 Location: 1047-16 53 bp Feature: gene Location: 1675-2451 bp Feature: domain Description: IstB_IS21_ATP Location: 1747-1828 bp Feature: domain Description: IstB_IS21_ATP Location: 1747-1828 bp Feature: domain Description: IstB_IS21 Location: 1834-2368 bp Feature: domain Description: IstB_IS21 Location: 1834-236 8 bp Feature: gene Location: 2588-3325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2597-2930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2597-2930 bp Feature: domain Description: GIIM Note: maturase Location: 3011-3218 bp Feature: domain Description: GIIM Note: maturase Location: 3011-3218 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SINN01000014.1 (3721 bp)
Overview 1 RT 1: 107-3609 bp Neighborhood of RT #1 [107, 3683] IstB_IS21_ATP IstB_IS21 COG4584 COG4584 RVT-GII Feature: gene Location: 107-883 bp Feature: domain Description: IstB_IS21_ATP Location: 179-260 bp Feature: domain Description: IstB_IS21_ATP Location: 17 9-260 bp Feature: domain Description: IstB_IS21 Location: 266-800 bp Feature: domain Description: IstB_IS21 Location: 266-800 bp Feature: gene Location: 897-2498 bp Feature: domain Description: COG4584 Location: 1083-1881 bp Feature: domain Description: COG4584 Location: 1083-1881 bp Feature: domain Description: COG4584 Location: 1884-2490 bp Feature: domain Description: COG4584 Location: 1884-2490 bp Feature: gene Location: 2538-3683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3276-3609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 327 6-3609 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SINN01000006.1 (205772 bp)
Overview 1 RT 1: 2-2806 bp Neighborhood of RT #1 [2, 2814] RVT-GII GIIM nodJ PRK13536 Feature: gene Location: 2-769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-374 bp Feature: domain Description: GIIM Note: maturase Location: 455-662 bp Feature: domain Description: GIIM Note: maturase Location: 455-662 bp Feature: gene Location: 1001-1789 bp Feature: domain Description: nodJ Location: 1037-1781 bp Feature: domain Description: nodJ Location: 1037-178 1 bp Feature: gene Location: 1786-2814 bp Feature: domain Description: PRK13536 Location: 1855-2806 bp Feature: domain Description: PRK13536 Location: 18 55-28 06 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT