myRT

myRT report for GCA_004307195.1_ASM430719v1

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Seq: SIJU01000022.1 (3868 bp)
Overview 1 RT 1: 604-3606 bp Neighborhood of RT #1 [604, 3797] RVT-GII GIIM RVT-GII GIIM Feature: gene Location: 604-1863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 796-1417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 796-1 41 7 bp Feature: domain Description: GIIM Note: maturase Location: 1471-1672 bp Feature: domain Description: GIIM Note: maturase Location: 1 471 -1 672 bp Feature: gene Location: 1926-2219 bp Feature: gene Location: 2538-3797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2730-3351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2730-3351 bp Feature: domain Description: GIIM Note: maturase Location: 3405-3606 bp Feature: domain Description: GIIM Note: maturase Location: 3405-3606 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SIJU01000001.1 (5648220 bp)
Overview 1 RT 1: 417410-428237 bp 2 RT 2: 612614-615992 bp 3 RT 3: 1627009-1632399 bp 4 RT 4: 1698275-1706046 bp 5 RT 5: 1939472-1943499 bp 6 RT 6: 4072532-4078300 bp 7 RT 7: 4224546-4233774 bp 8 RT 8: 5271093-5276849 bp Neighborhood of RT #1 [417410, 428239] AsmA ac_ac_CoA_syn RVT-GII GIIM PAS_8 CitA BaeS COG5490 Neighborhood of RT #2 [612614, 615992] PRK09174 PRK09173 RVT-GII GIIM Neighborhood of RT #3 [1627009, 1632401] Ald RVT-GII GIIM GlxA YdfG Neighborhood of RT #4 [1698275, 1706246] valS FadL RVT-GII GIIM SLR Neighborhood of RT #5 [1939472, 1943534] RVT-GII GIIM PurR Neighborhood of RT #6 [4072532, 4078341] LysR YfeH RVT-GII GIIM PRK10743 PldB Neighborhood of RT #7 [4224546, 4233821] Chb RVT-GII GIIM AcrB RND_mfp Neighborhood of RT #8 [5271093, 5276872] OmpR PckA RVT-GII GIIM PRK09256 AlkB Feature: gene Location: 417410-419302 bp Feature: domain Description: AsmA Location: 417494-419264 bp Feature: domain Description: AsmA Location: 417494-4192 64 bp Feature: gene Location: 419578-421530 bp Feature: domain Description: ac_ac_CoA_syn Location: 419590-421528 bp Feature: domain Description: ac_ac_CoA_syn Location: 419590-42 152 8 bp Feature: gene Location: 421938-423608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 422541-423162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 2 541-42 3162 bp Feature: domain Description: GIIM Note: maturase Location: 423216-423417 bp Feature: domain Description: GIIM Note: maturase Location: 42 32 16-42 3417 bp Feature: gene Location: 423680-427576 bp Feature: domain Description: PAS_8 Location: 426074-426176 bp Feature: domain Description: PAS_8 Location: 42 6074-42 6176 bp Feature: domain Description: CitA Location: 426470-426644 bp Feature: domain Description: CitA Location: 42 6470-42 6644 bp Feature: domain Description: BaeS Location: 426779-427565 bp Feature: domain Description: BaeS Location: 42 6779-42 7565 bp Feature: gene Location: 427790-428239 bp Feature: domain Description: COG5490 Location: 427793-428237 bp Feature: domain Description: COG5490 Location: 42 7793-42 82 37 bp Feature: gene Location: 612614-613237 bp Feature: domain Description: PRK09174 Location: 612620-613229 bp Feature: domain Description: PRK09174 Location: 612 62 0-6132 2 9 bp Feature: gene Location: 613241-613729 bp Feature: domain Description: PRK09173 Location: 613253-613727 bp Feature: domain Description: PRK09173 Location: 6132 53-61372 7 bp Feature: gene Location: 613978-615648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 614581-615202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 614581-6152 02 bp Feature: domain Description: GIIM Note: maturase Location: 615256-615457 bp Feature: domain Description: GIIM Note: maturase Location: 6152 56-615457 bp Feature: gene Location: 615655-615804 bp Feature: gene Location: 615855-615992 bp Feature: gene Location: 1627009-1628127 bp Feature: domain Description: Ald Location: 1627012-1628116 bp Feature: domain Description: Ald Location: 162 7012 -162 8116 bp Feature: gene Location: 1628159-1628500 bp Feature: gene Location: 1628680-1630350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1629283-1629904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162 92 83-162 9904 bp Feature: domain Description: GIIM Note: maturase Location: 1629958-1630159 bp Feature: domain Description: GIIM Note: maturase Location: 162 9958-1630159 bp Feature: gene Location: 1630472-1631497 bp Feature: domain Description: GlxA Location: 1631096-1631492 bp Feature: domain Description: GlxA Location: 1631096-1631492 bp Feature: gene Location: 1631652-1632401 bp Feature: domain Description: YdfG Location: 1631655-1632399 bp Feature: domain Description: YdfG Location: 1631655-1632 399 bp Feature: gene Location: 1698275-1701118 bp Feature: domain Description: valS Location: 1698281-1701104 bp Feature: domain Description: valS Location: 16982 81-1701104 bp Feature: gene Location: 1701516-1702790 bp Feature: domain Description: FadL Location: 1701588-1702788 bp Feature: domain Description: FadL Location: 1701588-1702 788 bp Feature: gene Location: 1703038-1704708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1703641-1704262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1703641-17042 62 bp Feature: domain Description: GIIM Note: maturase Location: 1704316-1704517 bp Feature: domain Description: GIIM Note: maturase Location: 1704316-1704517 bp Feature: gene Location: 1704812-1705423 bp Feature: gene Location: 1705443-1706246 bp Feature: domain Description: SLR Location: 1705617-1706046 bp Feature: domain Description: SLR Location: 1705617-1706046 bp Feature: gene Location: 1939472-1939609 bp Feature: gene Location: 1939660-1939809 bp Feature: gene Location: 1939816-1941486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1940419-1941040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1940419-1941040 bp Feature: domain Description: GIIM Note: maturase Location: 1941094-1941295 bp Feature: domain Description: GIIM Note: maturase Location: 1941094-19412 95 bp Feature: gene Location: 1942099-1942398 bp Feature: gene Location: 1942479-1943534 bp Feature: domain Description: PurR Location: 1942515-1943499 bp Feature: domain Description: PurR Location: 1942 515-1943499 bp Feature: gene Location: 4072532-4073386 bp Feature: domain Description: LysR Location: 4072538-4073369 bp Feature: domain Description: LysR Location: 4072 538-4073369 bp Feature: gene Location: 4073477-4074481 bp Feature: domain Description: YfeH Location: 4073483-4074452 bp Feature: domain Description: YfeH Location: 4073483-4074452 bp Feature: gene Location: 4074572-4076242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4075175-4075796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4075175-4075796 bp Feature: domain Description: GIIM Note: maturase Location: 4075850-4076051 bp Feature: domain Description: GIIM Note: maturase Location: 4075850-4076051 bp Feature: gene Location: 4076491-4076961 bp Feature: domain Description: PRK10743 Location: 4076494-4076905 bp Feature: domain Description: PRK10743 Location: 4076494-4076905 bp Feature: gene Location: 4077208-4078341 bp Feature: domain Description: PldB Location: 4077400-4078300 bp Feature: domain Description: PldB Location: 4077400-4078300 bp Feature: gene Location: 4224546-4225328 bp Feature: gene Location: 4225448-4227604 bp Feature: domain Description: Chb Location: 4225700-4227575 bp Feature: domain Description: Chb Location: 42 2 5700-42 2 7575 bp Feature: gene Location: 4227611-4229281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4228214-4228835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 2 82 14-42 2 8835 bp Feature: domain Description: GIIM Note: maturase Location: 4228889-4229090 bp Feature: domain Description: GIIM Note: maturase Location: 42 2 8889-42 2 9090 bp Feature: gene Location: 4229509-4232655 bp Feature: domain Description: AcrB Location: 4229545-4232557 bp Feature: domain Description: AcrB Location: 42 2 9545-42 32 557 bp Feature: gene Location: 4232682-4233821 bp Feature: domain Description: RND_mfp Location: 4232814-4233774 bp Feature: domain Description: RND_mfp Location: 42 32 814-42 33774 bp Feature: gene Location: 5271093-5271845 bp Feature: domain Description: OmpR Location: 5271120-5271837 bp Feature: domain Description: OmpR Location: 52 7112 0-52 71837 bp Feature: gene Location: 5272165-5273775 bp Feature: domain Description: PckA Location: 5272198-5273755 bp Feature: domain Description: PckA Location: 52 72 198-52 73755 bp Feature: gene Location: 5274025-5275695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5274628-5275249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 7462 8-52 752 49 bp Feature: domain Description: GIIM Note: maturase Location: 5275303-5275504 bp Feature: domain Description: GIIM Note: maturase Location: 52 75303-52 75504 bp Feature: gene Location: 5275816-5276259 bp Feature: domain Description: PRK09256 Location: 5275834-5276239 bp Feature: domain Description: PRK092 56 Location: 52 75834-52 762 39 bp Feature: gene Location: 5276261-5276872 bp Feature: domain Description: AlkB Location: 5276273-5276849 bp Feature: domain Description: AlkB Location: 52 762 73-52 76849 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SIJU01000002.1 (564708 bp)
Overview 1 RT 1: 38405-42484 bp Neighborhood of RT #1 [38405, 42484] PRK09652 anti_sig_ChrR RVT-GII GIIM Feature: gene Location: 38405-39079 bp Feature: domain Description: PRK09652 Location: 38576-39068 bp Feature: domain Description: PRK09652 Location: 3 8576-3 9068 bp Feature: gene Location: 39076-39729 bp Feature: domain Description: anti_sig_ChrR Location: 39088-39724 bp Feature: domain Description: anti_sig_ChrR Location: 3 9088-3 9724 bp Feature: gene Location: 40008-41678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40611-41232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40611-4123 2 bp Feature: domain Description: GIIM Note: maturase Location: 41286-41487 bp Feature: domain Description: GIIM Note: maturase Location: 41286-41487 bp Feature: gene Location: 41755-41934 bp Feature: gene Location: 42248-42484 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT