myRT

myRT report for GCA_004307395.1_ASM430739v1

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Seq: CP035743.1 (2584763 bp)
Overview 1 RT 1: 2-3459 bp 2 RT 2: 44298-49139 bp 3 RT 3: 266723-270126 bp 4 RT 4: 429762-433048 bp 5 RT 5: 1883287-1886536 bp 6 RT 6: 2015350-2020989 bp 7 RT 7: 2037891-2043101 bp 8 RT 8: 2083271-2085942 bp 9 RT 9: 2579240-2584004 bp Neighborhood of RT #1 [2, 3459] MFS_LmrB_MDR_like MFS_LmrB_MDR_like RVT-GII RVT-GII Neighborhood of RT #2 [44298, 49174] RVT-GII RVT-GII eMpr PRK06526 Neighborhood of RT #3 [266723, 270140] RVT-GII GIIM ABCF_EF-3 Neighborhood of RT #4 [429762, 433275] group_II_RT_mat RVT-GII GIIM AAA_21 Neighborhood of RT #5 [1883287, 1886601] HmoA GIIM RVT-GII EcsB Neighborhood of RT #6 [2015350, 2020989] ModF Heme_Cu_Oxidase_III_1 RVT-GII GIIM PRK00331 Neighborhood of RT #7 [2037891, 2043151] GIIM RVT-GII RVT-GII RVT-GII MFS_LmrB_MDR_like Neighborhood of RT #8 [2083271, 2085942] nicotinamidase_related GIIM RVT-GII Neighborhood of RT #9 [2579240, 2584004] DDE_Tnp_ISL3 COG3464 RVT-GII GIIM group_II_RT_mat Feature: gene Location: 2-229 bp Feature: domain Description: MFS_LmrB_MDR_like Location: 5-197 bp Feature: domain Description: MFS_LmrB_MDR_like Location: 5-1 97 bp Feature: gene Location: 202-669 bp Feature: domain Description: MFS_LmrB_MDR_like Location: 226-598 bp Feature: domain Description: MFS_LmrB_MDR_like Location: 226-598 bp Feature: gene Location: 1206-1580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1431-1575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 431 -1 575 bp Feature: gene Location: 1644-2087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1647-2046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 647-2046 bp Feature: gene Location: 2631-2840 bp Feature: gene Location: 3193-3459 bp Feature: gene Location: 44298-44435 bp Feature: gene Location: 45018-45314 bp Feature: gene Location: 46904-47035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46907-47030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46907-47030 bp Feature: gene Location: 47099-47542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47102-47501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 471 02-47501 bp Feature: gene Location: 47672-48502 bp Feature: domain Description: eMpr Location: 47843-48368 bp Feature: domain Description: eMpr Location: 47843-48368 bp Feature: gene Location: 48842-49174 bp Feature: domain Description: PRK06526 Location: 48857-49139 bp Feature: domain Description: PRK06526 Location: 48857-491 39 bp Feature: gene Location: 266723-266875 bp Feature: gene Location: 266892-267050 bp Feature: gene Location: 267152-268504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 267377-267992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 267377-267992 bp Feature: domain Description: GIIM Note: maturase Location: 268052-268283 bp Feature: domain Description: GIIM Note: maturase Location: 268052-268283 bp Feature: gene Location: 269425-269592 bp Feature: gene Location: 269676-270140 bp Feature: domain Description: ABCF_EF-3 Location: 269682-270126 bp Feature: domain Description: ABCF_EF-3 Location: 269682-2701 26 bp Feature: gene Location: 429762-429920 bp Feature: gene Location: 430022-430306 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 430079-430196 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 430079-4301 96 bp Feature: gene Location: 430267-431373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 430270-430864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 430270-430864 bp Feature: domain Description: GIIM Note: maturase Location: 430924-431155 bp Feature: domain Description: GIIM Note: maturase Location: 430924-431 1 55 bp Feature: gene Location: 431435-431713 bp Feature: gene Location: 431854-433275 bp Feature: domain Description: AAA_21 Location: 432103-433048 bp Feature: domain Description: AAA_21 Location: 4321 03-433048 bp Feature: gene Location: 1883287-1883826 bp Feature: domain Description: HmoA Location: 1883530-1883749 bp Feature: domain Description: HmoA Location: 1 883530-1 883749 bp Feature: gene Location: 1883894-1884325 bp Feature: domain Description: GIIM Note: maturase Location: 1883933-1884164 bp Feature: domain Description: GIIM Note: maturase Location: 1 883933-1 8841 64 bp Feature: gene Location: 1884486-1884836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1884612-1884828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 88461 2-1 884828 bp Feature: gene Location: 1884890-1885120 bp Feature: gene Location: 1885483-1886601 bp Feature: domain Description: EcsB Location: 1885489-1886536 bp Feature: domain Description: EcsB Location: 1 885489-1 886536 bp Feature: gene Location: 2015350-2016150 bp Feature: domain Description: ModF Location: 2015371-2016052 bp Feature: domain Description: ModF Location: 201 5371 -201 6052 bp Feature: gene Location: 2016237-2016521 bp Feature: domain Description: Heme_Cu_Oxidase_III_1 Location: 2016309-2016471 bp Feature: domain Description: Heme_Cu_Oxidase_III_1 Location: 201 6309-201 6471 bp Feature: gene Location: 2016700-2017995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2016925-2017540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201 6925-201 7540 bp Feature: domain Description: GIIM Note: maturase Location: 2017600-2017831 bp Feature: domain Description: GIIM Note: maturase Location: 201 7600-201 7831 bp Feature: gene Location: 2018579-2020423 bp Feature: domain Description: PRK00331 Location: 2018624-2020421 bp Feature: domain Description: PRK00331 Location: 201 8624-2020421 bp Feature: gene Location: 2020762-2020989 bp Feature: gene Location: 2037891-2038082 bp Feature: gene Location: 2038554-2039069 bp Feature: domain Description: GIIM Note: maturase Location: 2038674-2038905 bp Feature: domain Description: GIIM Note: maturase Location: 2038674-2038905 bp Feature: gene Location: 2039257-2039604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2039272-2039545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2039272-2039545 bp Feature: gene Location: 2039940-2040086 bp Feature: gene Location: 2040408-2040695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2040414-2040684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 204041 4-2040684 bp Feature: gene Location: 2040697-2040870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2040700-2040865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2040700-2040865 bp Feature: gene Location: 2040830-2041273 bp Feature: gene Location: 2041703-2043151 bp Feature: domain Description: MFS_LmrB_MDR_like Location: 2041760-2043101 bp Feature: domain Description: MFS_LmrB_MDR_like Location: 2041 760-20431 01 bp Feature: gene Location: 2083271-2083816 bp Feature: domain Description: nicotinamidase_related Location: 2083289-2083751 bp Feature: domain Description: nicotinamidase_related Location: 2083289-2083751 bp Feature: gene Location: 2084123-2084638 bp Feature: domain Description: GIIM Note: maturase Location: 2084243-2084474 bp Feature: domain Description: GIIM Note: maturase Location: 2084243-2084474 bp Feature: gene Location: 2084677-2085303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2084785-2085214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2084785-208521 4 bp Feature: gene Location: 2085358-2085588 bp Feature: gene Location: 2085787-2085942 bp Feature: gene Location: 2579240-2579887 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 2579243-2579819 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 2579243-257981 9 bp Feature: gene Location: 2579844-2580566 bp Feature: domain Description: COG3464 Location: 2579853-2580510 bp Feature: domain Description: COG3464 Location: 2579853-258051 0 bp Feature: gene Location: 2581874-2582926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2581877-2582471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2581 877-2582471 bp Feature: domain Description: GIIM Note: maturase Location: 2582531-2582762 bp Feature: domain Description: GIIM Note: maturase Location: 2582531 -2582762 bp Feature: gene Location: 2582887-2583171 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2582944-2583061 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2582944-2583061 bp Feature: gene Location: 2583723-2584004 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_LmrB_MDR_like (cd17503), RVT-GII, eMpr (COG3591), PRK06526 (transposase; Provisional), GIIM (pfam08388), ABCF_EF-3 (cd03221), group_II_RT_mat (TIGR04416), AAA_21 (pfam13304), HmoA (COG2329), EcsB (pfam05975)
ModF (COG1119), Heme_Cu_Oxidase_III_1 (cd02864), PRK00331 (isomerizing glutamine--fructose-6-phosphate transaminase), nicotinamidase_related (cd01014), DDE_Tnp_ISL3 (pfam01610), COG3464 (Transposase )