myRT

myRT report for GCA_004309665.1_ASM430966v1

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Seq: SIWS01000053.1 (3628 bp)
Overview 1 RT 1: 3-3625 bp Neighborhood of RT #1 [3, 3625] PRK13704 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 3-1007 bp Feature: domain Description: PRK13704 Location: 882-1008 bp Feature: domain Description: PRK1 3704 Location: 882-1 008 bp Feature: gene Location: 1199-3100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1466-2297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 466-2297 bp Feature: domain Description: Intron_maturas2 Location: 2411-2669 bp Feature: domain Description: Intron_maturas2 Location: 241 1 -2669 bp Feature: domain Description: HNHc Note: nucleases Location: 2843-3005 bp Feature: domain Description: HNHc Note: nucleases Location: 2843-3005 bp Feature: gene Location: 3455-3625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13704 (plasmid SOS inhibition protein A; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: SIWS01000008.1 (185415 bp)
Overview 1 RT 1: 1185-3945 bp Neighborhood of RT #1 [1185, 3950] RVT-UG17 SLATT_5 PRK10597 Feature: gene Location: 1185-1322 bp Feature: gene Location: 1338-1472 bp Feature: gene Location: 1580-2950 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1808-2414 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1808-2 414 bp Feature: gene Location: 2928-3479 bp Feature: domain Description: SLATT_5 Location: 2934-3450 bp Feature: domain Description: SLATT_5 Location: 2 934-3450 bp Feature: gene Location: 3702-3950 bp Feature: domain Description: PRK10597 Location: 3705-3945 bp Feature: domain Description: PRK10597 Location: 3705-3945 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160), PRK10597 (DNA damage-inducible protein I; Provisional)

Seq: SIWS01000009.1 (184315 bp)
Overview 1 RT 1: 130969-134852 bp Neighborhood of RT #1 [130969, 134857] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 130969-131685 bp Feature: domain Description: rph Location: 130972-131680 bp Feature: domain Description: rph Location: 13 0972-13 1680 bp Feature: gene Location: 131737-132393 bp Feature: domain Description: pyrE Location: 131755-132388 bp Feature: domain Description: pyrE Location: 13 1755-13 23 88 bp Feature: gene Location: 132691-133650 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 132826-133375 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13 2826-13 3 3 75 bp Feature: gene Location: 133696-134292 bp Feature: domain Description: slmA Location: 133702-134278 bp Feature: domain Description: slmA Location: 13 3 702-13 4278 bp Feature: gene Location: 134399-134857 bp Feature: domain Description: dut Location: 134405-134852 bp Feature: domain Description: dut Location: 13 4405-13 4852 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)