myRT

myRT report for GCA_004312945.1_ASM431294v1

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Seq: BIKG01000011.1 (212990 bp)
Overview 1 RT 1: 7498-17206 bp Neighborhood of RT #1 [7498, 17226] AAA_13 AAA_13 COG0610 RVT-Retrons AAA_15 AAA_15 COG2958 Feature: gene Location: 7498-8676 bp Feature: domain Description: AAA_13 Location: 7591-7765 bp Feature: domain Description: AAA_1 3 Location: 7591 -7765 bp Feature: domain Description: AAA_13 Location: 7987-8560 bp Feature: domain Description: AAA_1 3 Location: 7987-8560 bp Feature: gene Location: 8669-11788 bp Feature: domain Description: COG0610 Location: 8753-11765 bp Feature: domain Description: COG061 0 Location: 8753-1 1 765 bp Feature: gene Location: 12330-13430 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12471-13032 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 2471 -1 3032 bp Feature: gene Location: 13603-15720 bp Feature: domain Description: AAA_15 Location: 13606-14023 bp Feature: domain Description: AAA_1 5 Location: 1 3606-1 4023 bp Feature: domain Description: AAA_15 Location: 14161-14587 bp Feature: domain Description: AAA_1 5 Location: 1 41 61 -1 4587 bp Feature: gene Location: 16294-17226 bp Feature: domain Description: COG2958 Location: 16312-17206 bp Feature: domain Description: COG2958 Location: 1 631 2-1 7206 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_13 (pfam13166), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-Retrons, AAA_15 (pfam13175), COG2958 (Uncharacterized protein )

Seq: BIKG01000016.1 (103628 bp)
Overview 1 RT 1: 32207-39060 bp Neighborhood of RT #1 [32207, 39077] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32207-32872 bp Feature: domain Description: INT_P4_C Location: 32312-32870 bp Feature: domain Description: INT_P4_C Location: 32 312 -32 870 bp Feature: gene Location: 33133-33573 bp Feature: domain Description: Integrase_1 Location: 33139-33355 bp Feature: domain Description: Integrase_1 Location: 33139-33355 bp Feature: gene Location: 33630-35708 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 34038-34482 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 34038-34482 bp Feature: gene Location: 35708-38317 bp Feature: domain Description: FimD Location: 35765-38306 bp Feature: domain Description: FimD Location: 35765-38306 bp Feature: gene Location: 38349-39077 bp Feature: domain Description: FimC Location: 38397-39060 bp Feature: domain Description: FimC Location: 38397-39060 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)