myRT

myRT report for GCA_004313645.1_ASM431364v1

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Seq: BILP01000012.1 (185986 bp)
Overview 1 RT 1: 32207-39060 bp Neighborhood of RT #1 [32207, 39077] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32207-32872 bp Feature: domain Description: INT_P4_C Location: 32312-32870 bp Feature: domain Description: INT_P4_C Location: 3231 2-32870 bp Feature: gene Location: 33133-33573 bp Feature: domain Description: Integrase_1 Location: 33139-33355 bp Feature: domain Description: Integrase_1 Location: 331 39-33355 bp Feature: gene Location: 33630-35708 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 34038-34482 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 34038-34482 bp Feature: gene Location: 35708-38317 bp Feature: domain Description: FimD Location: 35765-38306 bp Feature: domain Description: FimD Location: 35765-38306 bp Feature: gene Location: 38349-39077 bp Feature: domain Description: FimC Location: 38397-39060 bp Feature: domain Description: FimC Location: 38397-39060 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: BILP01000008.1 (260411 bp)
Overview 1 RT 1: 29239-38947 bp Neighborhood of RT #1 [29239, 38967] AAA_13 AAA_13 COG0610 RVT-Retrons AAA_15 AAA_15 COG2958 Feature: gene Location: 29239-30417 bp Feature: domain Description: AAA_13 Location: 29332-29506 bp Feature: domain Description: AAA_13 Location: 2 9332 -2 9506 bp Feature: domain Description: AAA_13 Location: 29728-30301 bp Feature: domain Description: AAA_13 Location: 2 972 8-30301 bp Feature: gene Location: 30410-33529 bp Feature: domain Description: COG0610 Location: 30494-33506 bp Feature: domain Description: COG0610 Location: 30494-33506 bp Feature: gene Location: 34071-35171 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34212-34773 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 342 12 -34773 bp Feature: gene Location: 35344-37461 bp Feature: domain Description: AAA_15 Location: 35347-35764 bp Feature: domain Description: AAA_15 Location: 35347-35764 bp Feature: domain Description: AAA_15 Location: 35902-36328 bp Feature: domain Description: AAA_15 Location: 35902 -3632 8 bp Feature: gene Location: 38035-38967 bp Feature: domain Description: COG2958 Location: 38053-38947 bp Feature: domain Description: COG2 958 Location: 38053-38947 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_13 (pfam13166), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-Retrons, AAA_15 (pfam13175), COG2958 (Uncharacterized protein )

Seq: BILP01000019.1 (75673 bp)
Overview 1 RT 1: 55002-58296 bp Neighborhood of RT #1 [55002, 58310] RVT-GII PRK10276 Feature: gene Location: 55002-55217 bp Feature: gene Location: 55484-55714 bp Feature: gene Location: 55948-57483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56353-57091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 563 53 -57091 bp Feature: gene Location: 57534-57767 bp Feature: gene Location: 57885-58310 bp Feature: domain Description: PRK10276 Location: 57888-58296 bp Feature: domain Description: PRK10276 Location: 57888-58296 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)