myRT

myRT report for GCA_004320075.1_ASM432007v1

Download annotations/find similar RTs

Seq: SEZY01000001.1 (2519613 bp)
Overview 1 RT 1: 271577-277274 bp 2 RT 2: 373461-379020 bp 3 RT 3: 698591-702247 bp 4 RT 4: 755829-760487 bp 5 RT 5: 992657-996058 bp 6 RT 6: 1217867-1222784 bp 7 RT 7: 1847416-1853543 bp 8 RT 8: 2298721-2304104 bp Neighborhood of RT #1 [271577, 277282] CcmA EcsB RVT-GII GIIM HmoA hemE Neighborhood of RT #2 [373461, 379031] GAF EzrA RVT-GII group_II_RT_mat NifS Neighborhood of RT #3 [698591, 702276] PolY_Pol_V_umuC GIIM RVT-GII RVT-GII Spo0M Neighborhood of RT #4 [755829, 760561] INT_ICEBs1_C_like RVT-GII GIIM GlnA HTH_GlnR-like Neighborhood of RT #5 [992657, 996111] COG3860 GIIM RVT-GII RVT-GII FtsW Neighborhood of RT #6 [1217867, 1222792] PRK13512 group_II_RT_mat RVT-GII PRK13673 MhpD Neighborhood of RT #7 [1847416, 1853557] GdpP rplI RVT-GII GIIM PRK05748 Neighborhood of RT #8 [2298721, 2304115] NarK RVT-GII RVT-GII GIIM M20_ArgE_RocB Feature: gene Location: 271577-272314 bp Feature: domain Description: CcmA Location: 271583-272255 bp Feature: domain Description: CcmA Location: 271 583-272255 bp Feature: gene Location: 272407-273525 bp Feature: domain Description: EcsB Location: 272413-273460 bp Feature: domain Description: EcsB Location: 27241 3-273460 bp Feature: gene Location: 274060-275355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274285-274900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274285-274900 bp Feature: domain Description: GIIM Note: maturase Location: 274960-275191 bp Feature: domain Description: GIIM Note: maturase Location: 274960-2751 91 bp Feature: gene Location: 275423-275962 bp Feature: domain Description: HmoA Location: 275666-275885 bp Feature: domain Description: HmoA Location: 275666-275885 bp Feature: gene Location: 276224-277282 bp Feature: domain Description: hemE Location: 276260-277274 bp Feature: domain Description: hemE Location: 276260-277274 bp Feature: gene Location: 373461-373916 bp Feature: domain Description: GAF Location: 373467-373911 bp Feature: domain Description: GAF Location: 373467-37391 1 bp Feature: gene Location: 374099-375799 bp Feature: domain Description: EzrA Location: 374108-375791 bp Feature: domain Description: EzrA Location: 3741 08-375791 bp Feature: gene Location: 376371-377000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 376596-376980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 376596-376980 bp Feature: gene Location: 377113-377667 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 377119-377464 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3771 1 9-377464 bp Feature: gene Location: 377895-379031 bp Feature: domain Description: NifS Location: 377898-379020 bp Feature: domain Description: NifS Location: 377898-379020 bp Feature: gene Location: 698591-699853 bp Feature: domain Description: PolY_Pol_V_umuC Location: 698630-699656 bp Feature: domain Description: PolY_Pol_V_umuC Location: 698630-699656 bp Feature: gene Location: 700024-700461 bp Feature: domain Description: GIIM Note: maturase Location: 700066-700297 bp Feature: domain Description: GIIM Note: maturase Location: 700066-700297 bp Feature: gene Location: 700492-700728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 700519-700717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70051 9-70071 7 bp Feature: gene Location: 700894-701073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 700897-701062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 700897-701 062 bp Feature: gene Location: 701682-701858 bp Feature: gene Location: 701869-702276 bp Feature: domain Description: Spo0M Location: 701878-702247 bp Feature: domain Description: Spo0M Location: 701 878-702247 bp Feature: gene Location: 755829-755966 bp Feature: gene Location: 756305-756865 bp Feature: domain Description: INT_ICEBs1_C_like Location: 756308-756791 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 756308-756791 bp Feature: gene Location: 756994-758289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 757219-757834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75721 9-757834 bp Feature: domain Description: GIIM Note: maturase Location: 757894-758125 bp Feature: domain Description: GIIM Note: maturase Location: 757894-7581 25 bp Feature: gene Location: 758829-760169 bp Feature: domain Description: GlnA Location: 758850-760161 bp Feature: domain Description: GlnA Location: 758850-7601 61 bp Feature: gene Location: 760193-760561 bp Feature: domain Description: HTH_GlnR-like Location: 760229-760487 bp Feature: domain Description: HTH_GlnR-like Location: 760229-760487 bp Feature: gene Location: 992657-992839 bp Feature: domain Description: COG3860 Location: 992672-992792 bp Feature: domain Description: COG3860 Location: 992672-992792 bp Feature: gene Location: 993008-993445 bp Feature: domain Description: GIIM Note: maturase Location: 993050-993281 bp Feature: domain Description: GIIM Note: maturase Location: 993050-993281 bp Feature: gene Location: 993476-993712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 993503-993701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 993503-993701 bp Feature: gene Location: 993713-994057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 993716-994016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99371 6-99401 6 bp Feature: gene Location: 994399-994557 bp Feature: gene Location: 994879-996111 bp Feature: domain Description: FtsW Location: 994918-996058 bp Feature: domain Description: FtsW Location: 99491 8-996058 bp Feature: gene Location: 1217867-1219192 bp Feature: domain Description: PRK13512 Location: 1217876-1219184 bp Feature: domain Description: PRK1 351 2 Location: 1 21 7876-1 21 91 84 bp Feature: gene Location: 1219271-1219825 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1219277-1219622 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 21 9277-1 21 9622 bp Feature: gene Location: 1219978-1220562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1220203-1220536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 220203-1 220536 bp Feature: gene Location: 1221162-1221551 bp Feature: domain Description: PRK13673 Location: 1221174-1221528 bp Feature: domain Description: PRK1 3673 Location: 1 221 1 74-1 221 528 bp Feature: gene Location: 1221887-1222792 bp Feature: domain Description: MhpD Location: 1222037-1222784 bp Feature: domain Description: MhpD Location: 1 222037-1 222784 bp Feature: gene Location: 1847416-1849383 bp Feature: domain Description: GdpP Location: 1847419-1849369 bp Feature: domain Description: GdpP Location: 1 84741 9-1 849369 bp Feature: gene Location: 1849380-1849826 bp Feature: domain Description: rplI Location: 1849383-1849821 bp Feature: domain Description: rplI Location: 1 849383-1 849821 bp Feature: gene Location: 1850373-1851668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1850598-1851213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 850598-1 851 21 3 bp Feature: domain Description: GIIM Note: maturase Location: 1851273-1851504 bp Feature: domain Description: GIIM Note: maturase Location: 1 851 273-1 851 504 bp Feature: gene Location: 1851798-1852001 bp Feature: gene Location: 1852118-1853557 bp Feature: domain Description: PRK05748 Location: 1852163-1853543 bp Feature: domain Description: PRK05748 Location: 1 8521 63-1 853543 bp Feature: gene Location: 2298721-2298897 bp Feature: gene Location: 2299330-2300508 bp Feature: domain Description: NarK Location: 2299345-2300488 bp Feature: domain Description: NarK Location: 2299345-2300488 bp Feature: gene Location: 2301327-2301506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2301330-2301495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2301 330-2301 495 bp Feature: gene Location: 2301539-2302021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2301545-2301920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2301 545-2301 920 bp Feature: gene Location: 2302062-2302376 bp Feature: domain Description: GIIM Note: maturase Location: 2302068-2302212 bp Feature: domain Description: GIIM Note: maturase Location: 2302068-230221 2 bp Feature: gene Location: 2302484-2304115 bp Feature: domain Description: M20_ArgE_RocB Location: 2302553-2304104 bp Feature: domain Description: M20_ArgE_RocB Location: 2302553-23041 04 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CcmA (COG4133), EcsB (pfam05975), RVT-GII, GIIM (pfam08388), HmoA (COG2329), hemE (TIGR01464), GAF (smart00065), EzrA (pfam06160), group_II_RT_mat (TIGR04416), NifS (COG1104)
PolY_Pol_V_umuC (cd01700), Spo0M (pfam07070), INT_ICEBs1_C_like (cd01189), GlnA (TIGR00653), HTH_GlnR-like (cd01105), COG3860 (Uncharacterized protein, DUF2087 family ), FtsW (COG0772), PRK13512 (coenzyme A disulfide reductase; Provisional), PRK13673 (hypothetical protein; Provisional), MhpD (COG3971)
GdpP (COG3887), rplI (PRK00137), PRK05748 (replicative DNA helicase; Provisional), NarK (COG2223), M20_ArgE_RocB (cd05654)