myRT

myRT report for GCA_004321525.1_ASM432152v1

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Seq: SIHL01000045.1 (6958 bp)
Overview 1 RT 1: 265-3010 bp Neighborhood of RT #1 [265, 3012] COG3436 RVT-GII DDE_Tnp_IS66 Feature: gene Location: 265-843 bp Feature: domain Description: COG3436 Location: 451-841 bp Feature: domain Description: COG3436 Location: 451 -841 bp Feature: gene Location: 1251-1520 bp Feature: gene Location: 1893-2159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1962-2142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 962-21 42 bp Feature: gene Location: 2198-2404 bp Feature: gene Location: 2695-3012 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2722-3010 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2722-301 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3436 (Transposase ), RVT-GII, DDE_Tnp_IS66 (pfam03050)

Seq: SIHL01000004.1 (348745 bp)
Overview 1 RT 1: 92587-97425 bp Neighborhood of RT #1 [92587, 97425] SLC13_permease SLC13_permease RVT-Retrons ABC_ATPase Feature: gene Location: 92587-92838 bp Feature: gene Location: 93138-94574 bp Feature: domain Description: SLC13_permease Location: 93291-93879 bp Feature: domain Description: SLC13_permease Location: 932 91-93879 bp Feature: domain Description: SLC13_permease Location: 93954-94563 bp Feature: domain Description: SLC13_permease Location: 93954-94563 bp Feature: gene Location: 95107-96093 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 95248-95806 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 952 48-95806 bp Feature: gene Location: 96080-96943 bp Feature: domain Description: ABC_ATPase Location: 96116-96836 bp Feature: domain Description: ABC_ATPase Location: 96116-96836 bp Feature: gene Location: 97198-97425 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLC13_permease (cd01115), RVT-Retrons, ABC_ATPase (pfam09818)

Seq: SIHL01000033.1 (45882 bp)
Overview 1 RT 1: 43959-45550 bp Neighborhood of RT #1 [43959, 45879] DUF2960 RVT-G2L Feature: gene Location: 43959-44207 bp Feature: domain Description: DUF2960 Location: 43962-44196 bp Feature: domain Description: DUF2960 Location: 43 962-44196 bp Feature: gene Location: 44327-44461 bp Feature: gene Location: 44614-45879 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 44893-45550 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 44893 -45550 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2960 (pfam11173), RVT-G2L