myRT

myRT report for GCA_004322045.1_ASM432204v1

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Seq: SCRN01000033.1 (198208 bp)
Overview 1 RT 1: 105220-117046 bp Neighborhood of RT #1 [105220, 117046] VRR_NUC DUF3396 dnaG RVT-UNC DUF262 DUF1524 Feature: gene Location: 105220-105948 bp Feature: domain Description: VRR_NUC Location: 105472-105784 bp Feature: domain Description: VRR_NUC Location: 1 05472-1 05784 bp Feature: gene Location: 105958-107139 bp Feature: domain Description: DUF3396 Location: 106369-106999 bp Feature: domain Description: DUF3396 Location: 1 06369-1 06999 bp Feature: gene Location: 107217-114797 bp Feature: domain Description: dnaG Location: 107232-108285 bp Feature: domain Description: dnaG Location: 1 07232-1 08285 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 109560-109812 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1 09560-1 0981 2 bp Feature: gene Location: 114939-116660 bp Feature: domain Description: DUF262 Location: 114975-115638 bp Feature: domain Description: DUF262 Location: 1 1 4975-1 1 5638 bp Feature: domain Description: DUF1524 Location: 116241-116595 bp Feature: domain Description: DUF1 524 Location: 1 1 6241 -1 1 6595 bp Feature: gene Location: 116735-117046 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VRR_NUC (smart00990), DUF3396 (pfam11876), dnaG (TIGR01391), RVT-UG1/RVT-UG19/RVT-UG10/RVT-DGRs(RVT-UNC), DUF262 (pfam03235), DUF1524 (pfam07510)

Seq: SCRN01000011.1 (128305 bp)
Overview 1 RT 1: 82039-87666 bp Neighborhood of RT #1 [82039, 87797] rpmA rplU RVT_N RVT-GII GIIM HNHc PRK10888 HTH_31 Feature: gene Location: 82039-82302 bp Feature: domain Description: rpmA Location: 82042-82285 bp Feature: domain Description: rpmA Location: 82 042 -82 2 85 bp Feature: gene Location: 82327-82638 bp Feature: domain Description: rplU Location: 82330-82636 bp Feature: domain Description: rplU Location: 82 330-82 636 bp Feature: gene Location: 83961-85664 bp Feature: domain Description: RVT_N Location: 84018-84261 bp Feature: domain Description: RVT_N Location: 84018-842 61 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84306-84954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84306-84954 bp Feature: domain Description: GIIM Note: maturase Location: 85008-85239 bp Feature: domain Description: GIIM Note: maturase Location: 85008-852 39 bp Feature: domain Description: HNHc Note: nucleases Location: 85470-85623 bp Feature: domain Description: HNHc Note: nucleases Location: 85470-8562 3 bp Feature: gene Location: 85779-86771 bp Feature: domain Description: PRK10888 Location: 85836-86766 bp Feature: domain Description: PRK10888 Location: 85836-86766 bp Feature: gene Location: 87456-87797 bp Feature: domain Description: HTH_31 Location: 87513-87666 bp Feature: domain Description: HTH_31 Location: 87513-87666 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpmA (PRK05435), rplU (PRK05573), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK10888 (octaprenyl diphosphate synthase; Provisional), HTH_31 (pfam13560)

Seq: SCRN01000040.1 (560023 bp)
Overview 1 RT 1: 27613-31032 bp Neighborhood of RT #1 [27613, 31055] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 27613-27954 bp Feature: gene Location: 27951-28868 bp Feature: gene Location: 28862-30151 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 29231-29918 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2923 1-29918 bp Feature: gene Location: 30198-30575 bp Feature: domain Description: Avd_like Location: 30225-30531 bp Feature: domain Description: Avd_like Location: 3 0225-3 053 1 bp Feature: gene Location: 30591-31055 bp Feature: domain Description: DUF1566 Location: 30804-31032 bp Feature: domain Description: DUF1566 Location: 3 0804-3 103 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)

Seq: SCRN01000049.1 (199946 bp)
Overview 1 RT 1: 61592-66461 bp Neighborhood of RT #1 [61592, 66511] INT_P4_C RVT-GII INT_RitA_C_like Feature: gene Location: 61592-62806 bp Feature: gene Location: 63044-63571 bp Feature: domain Description: INT_P4_C Location: 63146-63503 bp Feature: domain Description: INT_P4 _C Location: 6314 6-63503 bp Feature: gene Location: 64152-65408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64833-65406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64 833-654 06 bp Feature: gene Location: 65588-65899 bp Feature: gene Location: 65945-66511 bp Feature: domain Description: INT_RitA_C_like Location: 65951-66461 bp Feature: domain Description: INT_RitA_C_like Location: 65951-664 61 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-GII, INT_RitA_C_like (cd01188)