myRT

myRT report for GCA_004322615.1_ASM432261v1

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Seq: SEZX01000001.1 (2613955 bp)
Overview 1 RT 1: 3-4505 bp 2 RT 2: 83890-88989 bp 3 RT 3: 245973-249927 bp 4 RT 4: 597037-601609 bp 5 RT 5: 779243-784224 bp 6 RT 6: 1537636-1543326 bp 7 RT 7: 1568005-1571063 bp 8 RT 8: 1671729-1673499 bp 9 RT 9: 2102270-2107437 bp 10 RT 10: 2612112-2613331 bp Neighborhood of RT #1 [3, 4558] pyruv_carbox COG3860 RVT-GII GIIM RVT-GII group_II_RT_mat FtsW Neighborhood of RT #2 [83890, 88997] LysA RVT-GII RVT-GII TrkA Neighborhood of RT #3 [245973, 249927] PRK13512 GIIM RVT-CRISPR-like RVT-GII Neighborhood of RT #4 [597037, 601623] ABCF_EF-3 RVT-GII GIIM CcmA Neighborhood of RT #5 [779243, 784256] RpiR group_II_RT_mat RVT-GII CARDB POD-like_MBL-fold RHOD RHOD Neighborhood of RT #6 [1537636, 1543526] YfdV RVT-GII Acetyltransf_1 PRK07726 Neighborhood of RT #7 [1568005, 1571095] RVT-GII GIIM Bgal_small_N Bgal_small_N Neighborhood of RT #8 [1671729, 1673663] BCCT BCCT RVT-GII GIIM Neighborhood of RT #9 [2102270, 2107445] RVT-GII RVT-GII GIIM oxido_grp_1 NifS Neighborhood of RT #10 [2612112, 2613342] GIIM RVT-GII RVT-GII Feature: gene Location: 3-170 bp Feature: domain Description: pyruv_carbox Location: 33-168 bp Feature: domain Description: pyruv_carbox Location: 33-1 68 bp Feature: gene Location: 644-826 bp Feature: domain Description: COG3860 Location: 659-779 bp Feature: domain Description: COG3860 Location: 659-779 bp Feature: gene Location: 995-1978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1010-1523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 0-1 523 bp Feature: domain Description: GIIM Note: maturase Location: 1583-1814 bp Feature: domain Description: GIIM Note: maturase Location: 1 583-1 81 4 bp Feature: gene Location: 2236-2496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2239-2494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2239-2494 bp Feature: gene Location: 2527-2742 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2584-2740 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2584-2740 bp Feature: gene Location: 3326-4558 bp Feature: domain Description: FtsW Location: 3365-4505 bp Feature: domain Description: FtsW Location: 3365-4505 bp Feature: gene Location: 83890-84981 bp Feature: domain Description: LysA Location: 83926-84958 bp Feature: domain Description: LysA Location: 83926-84958 bp Feature: gene Location: 85130-85309 bp Feature: gene Location: 85430-86176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85433-86021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85433-86021 bp Feature: gene Location: 86509-86688 bp Feature: gene Location: 86862-87551 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86865-87447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86865-87447 bp Feature: gene Location: 87681-87968 bp Feature: gene Location: 88338-88997 bp Feature: domain Description: TrkA Location: 88347-88989 bp Feature: domain Description: TrkA Location: 88347-88989 bp Feature: gene Location: 245973-247298 bp Feature: domain Description: PRK13512 Location: 245982-247290 bp Feature: domain Description: PRK1 351 2 Location: 245982-247290 bp Feature: gene Location: 247377-247814 bp Feature: domain Description: GIIM Note: maturase Location: 247419-247650 bp Feature: domain Description: GIIM Note: maturase Location: 24741 9-247650 bp Feature: gene Location: 247929-248123 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 247956-248115 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 247956-2481 1 5 bp Feature: gene Location: 248129-248956 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 248354-248945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 248354-248945 bp Feature: gene Location: 249324-249482 bp Feature: gene Location: 249778-249927 bp Feature: gene Location: 597037-597501 bp Feature: domain Description: ABCF_EF-3 Location: 597046-597487 bp Feature: domain Description: ABCF_EF-3 Location: 597046-597487 bp Feature: gene Location: 597585-597752 bp Feature: gene Location: 598673-600112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 598985-599600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 598985-599600 bp Feature: domain Description: GIIM Note: maturase Location: 599660-599891 bp Feature: domain Description: GIIM Note: maturase Location: 599660-599891 bp Feature: gene Location: 600251-600973 bp Feature: gene Location: 600988-601623 bp Feature: domain Description: CcmA Location: 601003-601609 bp Feature: domain Description: CcmA Location: 601 003-601 609 bp Feature: gene Location: 779243-779998 bp Feature: domain Description: RpiR Location: 779252-779975 bp Feature: domain Description: RpiR Location: 779252-779975 bp Feature: gene Location: 780151-780705 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 780157-780502 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 7801 57-780502 bp Feature: gene Location: 781359-781544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 781464-781539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 781 464-781 539 bp Feature: gene Location: 782215-782775 bp Feature: domain Description: CARDB Location: 782440-782566 bp Feature: domain Description: CARDB Location: 782440-782566 bp Feature: gene Location: 782907-784256 bp Feature: domain Description: POD-like_MBL-fold Location: 782916-783498 bp Feature: domain Description: POD-like_MBL-fold Location: 78291 6-783498 bp Feature: domain Description: RHOD Location: 783720-783804 bp Feature: domain Description: RHOD Location: 783720-783804 bp Feature: domain Description: RHOD Location: 783993-784224 bp Feature: domain Description: RHOD Location: 783993-784224 bp Feature: gene Location: 1537636-1537806 bp Feature: gene Location: 1537913-1538821 bp Feature: domain Description: YfdV Location: 1537919-1538816 bp Feature: domain Description: YfdV Location: 1 53791 9-1 53881 6 bp Feature: gene Location: 1539361-1540053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1539586-1540012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 539586-1 54001 2 bp Feature: gene Location: 1540390-1541253 bp Feature: domain Description: Acetyltransf_1 Location: 1540909-1541212 bp Feature: domain Description: Acetyltransf_1 Location: 1 540909-1 541 21 2 bp Feature: gene Location: 1541391-1543526 bp Feature: domain Description: PRK07726 Location: 1541403-1543326 bp Feature: domain Description: PRK07726 Location: 1 541 403-1 543326 bp Feature: gene Location: 1568005-1568184 bp Feature: gene Location: 1568726-1568884 bp Feature: gene Location: 1568986-1570281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1569211-1569826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 56921 1 -1 569826 bp Feature: domain Description: GIIM Note: maturase Location: 1569886-1570117 bp Feature: domain Description: GIIM Note: maturase Location: 1 569886-1 5701 1 7 bp Feature: gene Location: 1570366-1570551 bp Feature: domain Description: Bgal_small_N Location: 1570372-1570516 bp Feature: domain Description: Bgal_small_N Location: 1 570372-1 57051 6 bp Feature: gene Location: 1570556-1571095 bp Feature: domain Description: Bgal_small_N Location: 1570607-1571063 bp Feature: domain Description: Bgal_small_N Location: 1 570607-1 571 063 bp Feature: gene Location: 1671729-1672055 bp Feature: domain Description: BCCT Location: 1671735-1671966 bp Feature: domain Description: BCCT Location: 1 671 735-1 671 966 bp Feature: gene Location: 1672135-1672386 bp Feature: domain Description: BCCT Location: 1672156-1672363 bp Feature: domain Description: BCCT Location: 1 6721 56-1 672363 bp Feature: gene Location: 1672629-1673135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1672632-1673040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 672632-1 673040 bp Feature: gene Location: 1673159-1673308 bp Feature: gene Location: 1673349-1673663 bp Feature: domain Description: GIIM Note: maturase Location: 1673355-1673499 bp Feature: domain Description: GIIM Note: maturase Location: 1 673355-1 673499 bp Feature: gene Location: 2102270-2102542 bp Feature: gene Location: 2102648-2102806 bp Feature: gene Location: 2102908-2103450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2103133-2103418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 031 33-21 0341 8 bp Feature: gene Location: 2103676-2104782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2103733-2104327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 03733-21 04327 bp Feature: domain Description: GIIM Note: maturase Location: 2104387-2104618 bp Feature: domain Description: GIIM Note: maturase Location: 21 04387-21 0461 8 bp Feature: gene Location: 2105075-2106088 bp Feature: domain Description: oxido_grp_1 Location: 2105099-2106053 bp Feature: domain Description: oxido_grp_1 Location: 21 05099-21 06053 bp Feature: gene Location: 2106297-2107445 bp Feature: domain Description: NifS Location: 2106309-2107437 bp Feature: domain Description: NifS Location: 21 06309-21 07437 bp Feature: gene Location: 2612112-2612246 bp Feature: gene Location: 2612291-2612518 bp Feature: domain Description: GIIM Note: maturase Location: 2612351-2612468 bp Feature: domain Description: GIIM Note: maturase Location: 261 2351 -261 2468 bp Feature: gene Location: 2612759-2612953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2612774-2612942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 261 2774-261 2942 bp Feature: gene Location: 2612959-2613342 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2613184-2613331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 261 31 84-261 3331 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pyruv_carbox (TIGR01235), COG3860 (Uncharacterized protein, DUF2087 family ), RVT-GII, GIIM (pfam08388), group_II_RT_mat (TIGR04416), FtsW (COG0772), LysA (COG0019), TrkA (COG0569), PRK13512 (coenzyme A disulfide reductase; Provisional), RVT-CRISPR
ABCF_EF-3 (cd03221), CcmA (COG4133), RpiR (COG1737), CARDB (pfam07705), POD-like_MBL-fold (cd07724), RHOD (smart00450), YfdV (COG0679), Acetyltransf_1 (pfam00583), PRK07726 (DNA topoisomerase 3), Bgal_small_N (smart01038)
BCCT (pfam02028), oxido_grp_1 (TIGR03558), NifS (COG1104)