myRT

myRT report for GCA_004323185.1_ASM432318v1

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Seq: NAPS01000028.1 (1041 bp)
Overview 1 RT 1: 1-636 bp Neighborhood of RT #1 [1, 1040] RVT-UG13 Feature: gene Location: 1-261 bp Feature: gene Location: 369-1040 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 375-636 bp Feature: RT Description: RVT-UG1 3 Note: UG1 3 RT Location: 375-636 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG13

Seq: NAPS01000006.1 (63392 bp)
Overview 1 RT 1: 19059-25177 bp Neighborhood of RT #1 [19059, 25177] RVT-UG25 Rnc Feature: gene Location: 19059-19451 bp Feature: gene Location: 19481-19690 bp Feature: gene Location: 21093-23879 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 22326-22722 bp Feature: RT Description: RVT-UG2 5 Note: UG2 5 RT Location: 2 2 32 6-2 2 72 2 bp Feature: gene Location: 24198-24851 bp Feature: domain Description: Rnc Location: 24234-24693 bp Feature: domain Description: Rnc Location: 2 42 34-2 4693 bp Feature: gene Location: 25022-25177 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG25, Rnc (COG0571)

Seq: NAPS01000016.1 (4785 bp)
Overview 1 RT 1: 2-2967 bp Neighborhood of RT #1 [2, 2967] YfmG RVT-DGRs Feature: gene Location: 2-238 bp Feature: domain Description: YfmG Location: 11-218 bp Feature: domain Description: YfmG Location: 11-218 bp Feature: gene Location: 689-1747 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 896-1541 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 896-1541 bp Feature: gene Location: 2013-2219 bp Feature: gene Location: 2821-2967 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), RVT-DGRs

Seq: NAPS01000003.1 (567970 bp)
Overview 1 RT 1: 67254-72233 bp Neighborhood of RT #1 [67254, 72259] RVT_N RVT-GII GIIM HNHc MATE_NorM_like Feature: gene Location: 67254-67424 bp Feature: gene Location: 68030-68185 bp Feature: gene Location: 68445-70298 bp Feature: domain Description: RVT_N Location: 68580-68820 bp Feature: domain Description: RVT_N Location: 68580-68820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68874-69552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68874 -69552 bp Feature: domain Description: GIIM Note: maturase Location: 69615-69837 bp Feature: domain Description: GIIM Note: maturase Location: 69615-69837 bp Feature: domain Description: HNHc Note: nucleases Location: 70065-70233 bp Feature: domain Description: HNHc Note: nucleases Location: 70065-70233 bp Feature: gene Location: 70375-70608 bp Feature: gene Location: 70805-72259 bp Feature: domain Description: MATE_NorM_like Location: 70910-72233 bp Feature: domain Description: MATE_NorM_like Location: 70910-72233 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), MATE_NorM_like (cd13137)