myRT

myRT report for GCA_004324395.1_ASM432439v1

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Seq: QYSJ01000041.1 (4485 bp)
Overview 1 RT 1: 9-2025 bp Neighborhood of RT #1 [9, 2025] RVT-Retrons Feature: gene Location: 9-905 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 75-660 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 75-660 bp Feature: gene Location: 928-1905 bp Feature: gene Location: 1891-2025 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: QYSJ01000002.1 (641750 bp)
Overview 1 RT 1: 301945-307271 bp Neighborhood of RT #1 [301945, 307273] PinE RVT-Retrons Tar Feature: gene Location: 301945-302553 bp Feature: domain Description: PinE Location: 301957-302530 bp Feature: domain Description: PinE Location: 301957-302 530 bp Feature: gene Location: 302787-303506 bp Feature: gene Location: 303589-304395 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 303640-303994 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 303640-303994 bp Feature: gene Location: 305118-305279 bp Feature: gene Location: 305636-307273 bp Feature: domain Description: Tar Location: 306092-307271 bp Feature: domain Description: Tar Location: 306092 -3072 71 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-Retrons, Tar (COG0840)

Seq: QYSJ01000007.1 (203589 bp)
Overview 1 RT 1: 147-5179 bp Neighborhood of RT #1 [147, 5223] COG5340 RVT-UG28 HATPase COG4190 Feature: gene Location: 147-332 bp Feature: gene Location: 563-1090 bp Feature: domain Description: COG5340 Location: 683-971 bp Feature: domain Description: COG53 40 Location: 683 -971 bp Feature: gene Location: 1223-2725 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 1511-2150 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 1511-2150 bp Feature: gene Location: 3036-4061 bp Feature: domain Description: HATPase Location: 3501-3903 bp Feature: domain Description: HATPase Location: 3 501-3 903 bp Feature: gene Location: 4837-5223 bp Feature: domain Description: COG4190 Location: 4852-5179 bp Feature: domain Description: COG4190 Location: 4852-5179 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5340 (Transcriptional regulator, predicted component of viral defense system ), RVT-UG28, HATPase (cl00075), COG4190 (Predicted transcriptional regulator )

Seq: QYSJ01000001.1 (1201143 bp)
Overview 1 RT 1: 508257-514270 bp Neighborhood of RT #1 [508257, 514317] PRK05367 RVT-UG17 RVT-UG17 SLATT_5 YcxB Feature: gene Location: 508257-511121 bp Feature: domain Description: PRK05367 Location: 508278-511116 bp Feature: domain Description: PRK05367 Location: 508278-511116 bp Feature: gene Location: 511359-511622 bp Feature: gene Location: 511670-512239 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 511685-512018 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 511685-512018 bp Feature: gene Location: 512257-512697 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 512479-512671 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 5124 79-512671 bp Feature: gene Location: 512709-513257 bp Feature: domain Description: SLATT_5 Location: 512718-513246 bp Feature: domain Description: SLATT_5 Location: 512718-51324 6 bp Feature: gene Location: 513823-514317 bp Feature: domain Description: YcxB Location: 514123-514270 bp Feature: domain Description: YcxB Location: 514 123-514 270 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05367 (aminomethyl-transferring glycine dehydrogenase), RVT-UG17, SLATT_5 (pfam18160), YcxB (pfam14317)