myRT

myRT report for GCA_004332095.1_ASM433209v1

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Seq: CM014765.1 (133377 bp)
Overview 1 RT 1: 4504-7944 bp 2 RT 2: 79785-83867 bp Neighborhood of RT #1 [4504, 7944] DUF1380 RVT_N RVT-GII GIIM HNHc Neighborhood of RT #2 [79785, 84004] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 4504-4926 bp Feature: domain Description: DUF1380 Location: 4507-4801 bp Feature: domain Description: DUF1 380 Location: 4507-4801 bp Feature: gene Location: 4923-5114 bp Feature: gene Location: 5428-7095 bp Feature: domain Description: RVT_N Location: 5476-5713 bp Feature: domain Description: RVT_N Location: 5476-571 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5764-6406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5764-6406 bp Feature: domain Description: GIIM Note: maturase Location: 6457-6691 bp Feature: domain Description: GIIM Note: maturase Location: 6457-6691 bp Feature: domain Description: HNHc Note: nucleases Location: 6901-7060 bp Feature: domain Description: HNHc Note: nucleases Location: 6901 -7060 bp Feature: gene Location: 7375-7557 bp Feature: gene Location: 7669-7944 bp Feature: gene Location: 79785-80216 bp Feature: domain Description: PRK10276 Location: 79836-80199 bp Feature: domain Description: PRK1 0276 Location: 79836-801 99 bp Feature: gene Location: 80414-80626 bp Feature: gene Location: 80701-82110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81028-81718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 028-81 71 8 bp Feature: gene Location: 82359-83330 bp Feature: domain Description: StbA Location: 82362-83307 bp Feature: domain Description: StbA Location: 82362-83307 bp Feature: gene Location: 83333-84004 bp Feature: domain Description: Plasmid_stab_B Location: 83348-83555 bp Feature: domain Description: Plasmid_stab_B Location: 83348-83555 bp Feature: domain Description: Plasmid_stab_B Location: 83660-83867 bp Feature: domain Description: Plasmid_stab_B Location: 83660-83867 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: QOVH01000001.1 (5475397 bp)
Overview 1 RT 1: 399193-404342 bp 2 RT 2: 551585-555438 bp 3 RT 3: 624144-628839 bp 4 RT 4: 993336-996241 bp 5 RT 5: 3974844-3980577 bp 6 RT 6: 4140420-4143815 bp 7 RT 7: 4599808-4606279 bp Neighborhood of RT #1 [399193, 404350] umuC PRK10276 RVT-GII PinE Neighborhood of RT #2 [551585, 555438] umuC PRK10276 RVT-GII Neighborhood of RT #3 [624144, 628877] LexA_DNA_bind PRK10597 RVT-GII PRK05318 Neighborhood of RT #4 [993336, 996291] RVT-GII int Neighborhood of RT #5 [3974844, 3980582] dam Phage_GPA RVT-GII DinI Neighborhood of RT #6 [4140420, 4143815] RVT-GII Neighborhood of RT #7 [4599808, 4606293] SbcB dacD RVT-GII PRK10016 YccC Feature: gene Location: 399193-400458 bp Feature: domain Description: umuC Location: 399196-400456 bp Feature: domain Description: umuC Location: 399196-400456 bp Feature: gene Location: 400460-400879 bp Feature: domain Description: PRK10276 Location: 400463-400874 bp Feature: domain Description: PRK102 76 Location: 400463-400874 bp Feature: gene Location: 400959-402443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 401361-402051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 401361-402 051 bp Feature: gene Location: 402452-402619 bp Feature: gene Location: 403841-404350 bp Feature: domain Description: PinE Location: 403889-404342 bp Feature: domain Description: PinE Location: 403889-404342 bp Feature: gene Location: 551585-552850 bp Feature: domain Description: umuC Location: 551588-552848 bp Feature: domain Description: umuC Location: 551588-552 848 bp Feature: gene Location: 552853-553272 bp Feature: domain Description: PRK10276 Location: 552856-553267 bp Feature: domain Description: PRK102 76 Location: 552 856-5532 67 bp Feature: gene Location: 553351-554835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 553753-554443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 553753-554443 bp Feature: gene Location: 554844-555011 bp Feature: gene Location: 555292-555438 bp Feature: gene Location: 624144-624536 bp Feature: domain Description: LexA_DNA_bind Location: 624222-624411 bp Feature: domain Description: LexA_DNA_bind Location: 62 42 2 2 -62 4411 bp Feature: gene Location: 624879-625112 bp Feature: domain Description: PRK10597 Location: 624882-625107 bp Feature: domain Description: PRK10597 Location: 62 4882 -62 5107 bp Feature: gene Location: 625191-626675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 625593-626283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 5593-62 62 83 bp Feature: gene Location: 626684-626851 bp Feature: gene Location: 627516-628877 bp Feature: domain Description: PRK05318 Location: 627540-628839 bp Feature: domain Description: PRK05318 Location: 62 7540-62 8839 bp Feature: gene Location: 993336-994820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 993738-994428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 993738-99442 8 bp Feature: gene Location: 994829-994996 bp Feature: gene Location: 995239-996291 bp Feature: domain Description: int Location: 995242-996241 bp Feature: domain Description: int Location: 9952 42 -9962 41 bp Feature: gene Location: 3974844-3975695 bp Feature: domain Description: dam Location: 3974847-3975618 bp Feature: domain Description: dam Location: 3974847-3975618 bp Feature: gene Location: 3975692-3978076 bp Feature: domain Description: Phage_GPA Location: 3976256-3977222 bp Feature: domain Description: Phage_GPA Location: 39762 56-39772 2 2 bp Feature: gene Location: 3978554-3980041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3978959-3979649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3978959-3979649 bp Feature: gene Location: 3980149-3980337 bp Feature: gene Location: 3980349-3980582 bp Feature: domain Description: DinI Location: 3980394-3980577 bp Feature: domain Description: DinI Location: 3980394-3980577 bp Feature: gene Location: 4140420-4141040 bp Feature: gene Location: 4141236-4141574 bp Feature: gene Location: 4141671-4143155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4142073-4142763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4142 073-4142 763 bp Feature: gene Location: 4143312-4143530 bp Feature: gene Location: 4143558-4143815 bp Feature: gene Location: 4599808-4601232 bp Feature: domain Description: SbcB Location: 4599814-4601230 bp Feature: domain Description: SbcB Location: 4599814-46012 30 bp Feature: gene Location: 4601407-4602576 bp Feature: domain Description: dacD Location: 4601416-4602571 bp Feature: domain Description: dacD Location: 4601416-4602 571 bp Feature: gene Location: 4603094-4604581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4603499-4604189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4603499-4604189 bp Feature: gene Location: 4604663-4605136 bp Feature: domain Description: PRK10016 Location: 4604666-4605125 bp Feature: domain Description: PRK10016 Location: 4604666-460512 5 bp Feature: gene Location: 4605220-4606293 bp Feature: domain Description: YccC Location: 4605241-4606279 bp Feature: domain Description: YccC Location: 46052 41-46062 79 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: QOVH01000004.1 (84207 bp)
Overview 1 RT 1: 44051-47751 bp Neighborhood of RT #1 [44051, 47849] umuC PRK10276 RVT-GII DUF2913 Feature: gene Location: 44051-44830 bp Feature: domain Description: umuC Location: 44054-44816 bp Feature: domain Description: umuC Location: 44054-44816 bp Feature: gene Location: 44830-45255 bp Feature: domain Description: PRK10276 Location: 44881-45241 bp Feature: domain Description: PRK10276 Location: 44881-45241 bp Feature: gene Location: 45333-46820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45738-46428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4573 8-46428 bp Feature: gene Location: 46826-46993 bp Feature: gene Location: 47235-47849 bp Feature: domain Description: DUF2913 Location: 47265-47751 bp Feature: domain Description: DUF2913 Location: 47265-47751 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CM014764.1 (200037 bp)
Overview 1 RT 1: 143963-147805 bp Neighborhood of RT #1 [143963, 147825] INT_Cre_C RVT-GII HHA Feature: gene Location: 143963-144280 bp Feature: gene Location: 144346-145482 bp Feature: domain Description: INT_Cre_C Location: 144769-145423 bp Feature: domain Description: INT_Cre_C Location: 14 4 769-14 54 23 bp Feature: gene Location: 145569-147056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145974-146664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 5974 -14 6664 bp Feature: gene Location: 147081-147539 bp Feature: gene Location: 147574-147825 bp Feature: domain Description: HHA Location: 147622-147805 bp Feature: domain Description: HHA Location: 14 7622-14 7805 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT