myRT

myRT report for GCA_004332115.1_ASM433211v1

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Seq: SJPA01000002.1 (394384 bp)
Overview 1 RT 1: 165900-170901 bp Neighborhood of RT #1 [165900, 170903] ParE_toxin PhdYeFM_antitox RVT-UG4 trmE Feature: gene Location: 165900-166232 bp Feature: domain Description: ParE_toxin Location: 165924-166188 bp Feature: domain Description: ParE_toxin Location: 1 65924-1 661 88 bp Feature: gene Location: 166229-166513 bp Feature: domain Description: PhdYeFM_antitox Location: 166250-166427 bp Feature: domain Description: PhdYeFM_antitox Location: 1 66250-1 66427 bp Feature: gene Location: 166816-167589 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 166936-167380 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 66936-1 67380 bp Feature: gene Location: 167686-169176 bp Feature: gene Location: 169473-170903 bp Feature: domain Description: trmE Location: 169512-170901 bp Feature: domain Description: trmE Location: 1 6951 2-1 70901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE_toxin (pfam05016), PhdYeFM_antitox (pfam02604), RVT-UG4, trmE (PRK05291)

Seq: SJPA01000015.1 (17776 bp)
Overview 1 RT 1: 8993-15599 bp Neighborhood of RT #1 [8993, 15599] DUF4062 COG4951 SSL2 RVT-GII GIIM DUF772 DDE_Tnp_1 Feature: gene Location: 8993-9646 bp Feature: domain Description: DUF4062 Location: 9023-9284 bp Feature: domain Description: DUF4062 Location: 902 3-92 84 bp Feature: gene Location: 9826-12231 bp Feature: domain Description: COG4951 Location: 9856-10993 bp Feature: domain Description: COG4951 Location: 9856-10993 bp Feature: domain Description: SSL2 Location: 11038-12187 bp Feature: domain Description: SSL2 Location: 11038-12 187 bp Feature: gene Location: 12806-14047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13004-13661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13004-13661 bp Feature: domain Description: GIIM Note: maturase Location: 13742-13961 bp Feature: domain Description: GIIM Note: maturase Location: 13742 -13961 bp Feature: gene Location: 14246-15292 bp Feature: domain Description: DUF772 Location: 14414-14633 bp Feature: domain Description: DUF772 Location: 14414-14633 bp Feature: domain Description: DDE_Tnp_1 Location: 14678-15242 bp Feature: domain Description: DDE_Tnp_1 Location: 14678-152 42 bp Feature: gene Location: 15432-15599 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4062 (pfam13271), COG4951 (Uncharacterized protein ), SSL2 (COG1061), RVT-GII, GIIM (pfam08388), DUF772 (pfam05598), DDE_Tnp_1 (pfam01609)

Seq: SJPA01000007.1 (94356 bp)
Overview 1 RT 1: 83281-88462 bp Neighborhood of RT #1 [83281, 88479] DUF3375 PHA02517 RVT-GII GIIM HTH_21 InsE Feature: gene Location: 83281-84732 bp Feature: domain Description: DUF3375 Location: 83314-84715 bp Feature: domain Description: DUF3 3 75 Location: 83 3 14-84715 bp Feature: gene Location: 85427-85942 bp Feature: domain Description: PHA02517 Location: 85430-85832 bp Feature: domain Description: PHA02517 Location: 8543 0-8583 2 bp Feature: gene Location: 86046-87287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86244-86901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86244-86901 bp Feature: domain Description: GIIM Note: maturase Location: 86979-87201 bp Feature: domain Description: GIIM Note: maturase Location: 86979-87201 bp Feature: gene Location: 87779-88189 bp Feature: domain Description: HTH_21 Location: 87908-88058 bp Feature: domain Description: HTH_21 Location: 87908-88058 bp Feature: gene Location: 88186-88479 bp Feature: domain Description: InsE Location: 88189-88462 bp Feature: domain Description: InsE Location: 88189-88462 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3375 (pfam11855), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HTH_21 (pfam13276), InsE (COG2963)