myRT

myRT report for GCA_004334975.1_ASM433497v1

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Seq: MWML01000062.1 (42354 bp)
Overview 1 RT 1: 1-3985 bp Neighborhood of RT #1 [1, 4119] RVT_N RVT-GII GIIM HNHc uvrC Feature: gene Location: 1-1653 bp Feature: domain Description: RVT_N Location: 10-253 bp Feature: domain Description: RVT_N Location: 1 0-253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 298-946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 298-946 bp Feature: domain Description: GIIM Note: maturase Location: 1000-1231 bp Feature: domain Description: GIIM Note: maturase Location: 1 000-1 231 bp Feature: domain Description: HNHc Note: nucleases Location: 1462-1615 bp Feature: domain Description: HNHc Note: nucleases Location: 1 462-1 61 5 bp Feature: gene Location: 2169-3098 bp Feature: gene Location: 3103-4119 bp Feature: domain Description: uvrC Location: 3112-3985 bp Feature: domain Description: uvrC Location: 31 1 2-3985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), uvrC (TIGR00194)

Seq: MWML01000894.1 (678 bp)
Overview 1 RT 1: 25-677 bp Neighborhood of RT #1 [25, 677] RVT-GII Feature: gene Location: 25-300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34-229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34-2 2 9 bp Feature: gene Location: 375-677 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MWML01000527.1 (2850 bp)
Overview 1 RT 1: 892-2722 bp Neighborhood of RT #1 [892, 2766] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 892-2766 bp Feature: domain Description: RVT_N Location: 1108-1348 bp Feature: domain Description: RVT_N Location: 1108-13 48 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1396-2041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 96-2041 bp Feature: domain Description: GIIM Note: maturase Location: 2095-2326 bp Feature: domain Description: GIIM Note: maturase Location: 2095-23 26 bp Feature: domain Description: HNHc Note: nucleases Location: 2569-2722 bp Feature: domain Description: HNHc Note: nucleases Location: 2569-2722 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: MWML01000067.1 (40913 bp)
Overview 1 RT 1: 20855-22783 bp Neighborhood of RT #1 [20855, 22797] RVT-GII DDE_3 Feature: gene Location: 20855-21277 bp Feature: gene Location: 21056-21454 bp Feature: gene Location: 21646-22125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21682-21991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21682-21991 bp Feature: gene Location: 22269-22409 bp Feature: gene Location: 22492-22797 bp Feature: domain Description: DDE_3 Location: 22510-22783 bp Feature: domain Description: DDE_3 Location: 22510-22783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_3 (pfam13358)

Seq: MWML01001114.1 (483 bp)
Overview 1 RT 1: 24-453 bp Neighborhood of RT #1 [24, 482] RVT-UG1 Feature: gene Location: 24-482 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 63-453 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 63-45 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG1

Seq: MWML01000006.1 (103645 bp)
Overview 1 RT 1: 62179-70693 bp Neighborhood of RT #1 [62179, 70716] PerM uvrA RVT_N RVT-GII GIIM HNHc MFS_YajR_like MFS_YajR_like Feature: gene Location: 62179-63264 bp Feature: domain Description: PerM Location: 62281-63238 bp Feature: domain Description: PerM Location: 6 2281-6 3238 bp Feature: gene Location: 63286-66408 bp Feature: domain Description: uvrA Location: 63292-66139 bp Feature: domain Description: uvrA Location: 6 3292-6 6 139 bp Feature: gene Location: 67497-69197 bp Feature: domain Description: RVT_N Location: 67554-67797 bp Feature: domain Description: RVT_N Location: 6 7554-6 7797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67842-68490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 7842-6 8490 bp Feature: domain Description: GIIM Note: maturase Location: 68541-68775 bp Feature: domain Description: GIIM Note: maturase Location: 6 8541-6 8775 bp Feature: domain Description: HNHc Note: nucleases Location: 69006-69159 bp Feature: domain Description: HNHc Note: nucleases Location: 6 9006 -6 9159 bp Feature: gene Location: 69530-70039 bp Feature: domain Description: MFS_YajR_like Location: 69596-69992 bp Feature: domain Description: MFS_YajR_like Location: 6 9596 -6 9992 bp Feature: gene Location: 70036-70716 bp Feature: domain Description: MFS_YajR_like Location: 70042-70693 bp Feature: domain Description: MFS_YajR_like Location: 70042-706 93 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PerM (COG0628), uvrA (PRK00349), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), MFS_YajR_like (cd17472)

Seq: MWML01000968.1 (580 bp)
Overview 1 RT 1: 3-470 bp Neighborhood of RT #1 [3, 577] RVT-UG7 Feature: gene Location: 3-284 bp Feature: gene Location: 338-577 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 341-470 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 341-47 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7

Seq: MWML01000341.1 (9181 bp)
Overview 1 RT 1: 890-5286 bp Neighborhood of RT #1 [890, 5286] HTH_Tnp_ISL3 DDE_Tnp_ISL3 RVT_N RVT-GII GIIM HNH Feature: gene Location: 890-1060 bp Feature: gene Location: 1529-2743 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 1793-1937 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 1793-1937 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 1982-2684 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 198 2-268 4 bp Feature: gene Location: 2655-4322 bp Feature: domain Description: RVT_N Location: 2700-2943 bp Feature: domain Description: RVT_N Location: 2700-2943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2988-3630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 298 8 -3630 bp Feature: domain Description: GIIM Note: maturase Location: 3681-3915 bp Feature: domain Description: GIIM Note: maturase Location: 368 1-3915 bp Feature: domain Description: HNH Note: nucleases Location: 4167-4293 bp Feature: domain Description: HNH Note: nucleases Location: 4167-4293 bp Feature: gene Location: 4450-4593 bp Feature: gene Location: 4861-5286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: MWML01000346.1 (8989 bp)
Overview 1 RT 1: 4553-8816 bp Neighborhood of RT #1 [4553, 8872] RVT_N RVT-GII GIIM HNHc PRK05305 PssA Feature: gene Location: 4553-4756 bp Feature: gene Location: 4801-5085 bp Feature: gene Location: 5522-7222 bp Feature: domain Description: RVT_N Location: 5579-5822 bp Feature: domain Description: RVT_N Location: 5579 -5822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5867-6515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5867-6515 bp Feature: domain Description: GIIM Note: maturase Location: 6569-6800 bp Feature: domain Description: GIIM Note: maturase Location: 6569 -6800 bp Feature: domain Description: HNHc Note: nucleases Location: 7043-7184 bp Feature: domain Description: HNHc Note: nucleases Location: 7043-7184 bp Feature: gene Location: 7340-7972 bp Feature: domain Description: PRK05305 Location: 7364-7784 bp Feature: domain Description: PRK05305 Location: 7364-7784 bp Feature: gene Location: 8000-8872 bp Feature: domain Description: PssA Location: 8135-8816 bp Feature: domain Description: PssA Location: 8135-8816 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK05305 (phosphatidylserine decarboxylase family protein), PssA (COG1183)

Seq: MWML01000595.1 (1732 bp)
Overview 1 RT 1: 49-1316 bp Neighborhood of RT #1 [49, 1351] RVT-GII RVT-GII GIIM Feature: gene Location: 49-888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 307-721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 307-721 bp Feature: gene Location: 899-1351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 905-1043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 905-10 43 bp Feature: domain Description: GIIM Note: maturase Location: 1118-1316 bp Feature: domain Description: GIIM Note: maturase Location: 1118-1316 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)